RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 YPEL2Q96QA6 119 aa13.39□□□□□ -0.27
CKAP4-201ENST00000378026 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
CKAP4-201ENST00000378026 PROK2Q9HC23 129 aa13.39□□□□□ -0.27
CKAP4-201ENST00000378026 DLL3Q9NYJ7 618 aa13.39□□□□□ -0.27
CKAP4-201ENST00000378026 RHBDL1O75783 438 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 MRPL18Q9H0U6 180 aaKnown RBP13.38□□□□□ -0.27
CKAP4-201ENST00000378026 LIN7CQ9NUP9 197 aaKnown RBP13.38□□□□□ -0.27
CKAP4-201ENST00000378026 RARRES3Q9UL19 164 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 TIMM9Q9Y5J7 89 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 TRBV20OR9-2A0A075B6H5 130 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 NXPH1P58417 271 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 PCBD1P61457 104 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 TECTBQ96PL2 329 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 CBR3O75828 277 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 SRSF7Q16629 238 aaKnown RBP eCLIP13.38□□□□□ -0.27
CKAP4-201ENST00000378026 CEACAM21Q3KPI0 293 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 COL5A1-AS1Q5SY13 56 aa13.38□□□□□ -0.27
CKAP4-201ENST00000378026 C19orf25Q9UFG5 118 aaPredicted RBP13.38□□□□□ -0.27
CKAP4-201ENST00000378026 NBEAQ8NFP9 2946 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 A0A0G2JMM0 328 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 A0A1W2PPB8 328 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 A0A1W2PRS3 328 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 KIR3DP1A8MWS1 328 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 DEGS1O15121 323 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 IER3P46695 156 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 RAC3P60763 192 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 Q8NFD4 153 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 C1QTNF5Q9BXJ0 243 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 FCN1O00602 326 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 AQP7O14520 342 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 LINC00205P59089 165 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 UBE2NP61088 152 aaKnown RBP13.37□□□□□ -0.27
CKAP4-201ENST00000378026 DMDP11532 3685 aa13.37□□□□□ -0.27
CKAP4-201ENST00000378026 A0A1W2PPV4 95 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 ZNF716A6NP11 495 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 SH2D1BO14796 132 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 LHX2P50458 406 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 FOXL1Q12952 345 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 KRTAP27-1Q3LI81 207 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 FAM58AQ8N1B3 248 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 PRRG4Q9BZD6 226 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
CKAP4-201ENST00000378026 PAFAH1B2P68402 229 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 HLA-DRB5Q30154 266 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 KIAA1644Q3SXP7 199 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 KMT5CQ86Y97 462 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 FSCN3Q9NQT6 498 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 ODAMA1E959 279 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 CARFQ8N187 725 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 STPG4Q8N801 248 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 OR10G8Q8NGN5 311 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 OR10D3Q8NH80 312 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 ASCL3Q9NQ33 180 aa13.36□□□□□ -0.27
CKAP4-201ENST00000378026 SLC35B1P78383 322 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 KRTCAP3Q53RY4 240 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 WIPI1Q5MNZ9 446 aaPredicted RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SIGLECL1Q8N7X8 197 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 OR1L6Q8NGR2 347 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 RNASE8Q8TDE3 154 aaKnown RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SLC35E1Q96K37 410 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 TXN2Q99757 166 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 PARD6GQ9BYG4 376 aaPredicted RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 ZFP30Q9Y2G7 519 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 DIRC3C9JPN6 131 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SYNGR4O95473 234 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 PMCHP20382 165 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 CA6P23280 308 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 ARF1P84077 181 aaKnown RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SPATA45Q537H7 98 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 WDR74Q6RFH5 385 aaPredicted RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SF3B5Q9BWJ5 86 aaKnown RBP13.35□□□□□ -0.27
CKAP4-201ENST00000378026 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
CKAP4-201ENST00000378026 SNURFLB1AK76 121 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 PDE6DO43924 150 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 S1PR2O95136 353 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 RFPL3SP0C7P2 107 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
CKAP4-201ENST00000378026 RPL30P62888 115 aaKnown RBP13.34□□□□□ -0.27
CKAP4-201ENST00000378026 SRYQ05066 204 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 PCOLCEQ15113 449 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 ATOH7Q8N100 152 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
CKAP4-201ENST00000378026 IGHEP01854 428 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 SSR4P51571 173 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 PTTG1IPP53801 180 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 SPATA46Q5T0L3 261 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 PRDM14Q9GZV8 571 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 DEPPQ9NTK1 212 aa13.34□□□□□ -0.27
CKAP4-201ENST00000378026 PIGBOS1A0A0B4J2F0 54 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 C20orf202A1L168 122 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 COMPP49747 757 aaPredicted RBP13.33□□□□□ -0.27
CKAP4-201ENST00000378026 Q6ZN92 141 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 CADM4Q8NFZ8 388 aa13.33□□□□□ -0.27
CKAP4-201ENST00000378026 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms