RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 RBKSQ9H477 322 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 MDC1Q14676 2089 aaKnown RBP15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM14DPA8MWL7 114 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 SNRPCP09234 159 aaKnown RBP15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 LTBRP36941 435 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 HSPE1P61604 102 aaKnown RBP15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 SLC25A53Q5H9E4 307 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 SLC16A13Q7RTY0 426 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 LHFPL5Q8TAF8 219 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 VWCEQ96DN2 955 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 GP6Q9HCN6 339 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 JPT1Q9UK76 154 aa15.26■□□□□ 0.03
CNTNAP3-204ENST00000377656 RHBDL1O75783 438 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 MGPP08493 103 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 PF4V1P10720 104 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 SPANXN1Q5VSR9 72 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM54Q969K7 222 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 LINC00470Q9BZP3 86 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 CHCHD2Q9Y6H1 151 aaPredicted RBP15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 KLF4O43474 513 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 SLC25A17O43808 307 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 RECKO95980 971 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 IGLV3-19P01714 112 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 NMBP08949 121 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 NPBWR2P48146 333 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 MFAP2P55001 183 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 PRNTQ86SH4 94 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 BET1LQ9NYM9 111 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 IGKV3D-11A0A0A0MRZ8 115 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 M0R143 59 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 C1QL1O75973 258 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 RFPL3SP0C7P2 107 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 HOXA4Q00056 320 aaPredicted RBP15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 TAF15Q92804 592 aaKnown RBP eCLIP15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 MRPL37Q9BZE1 423 aaKnown RBP15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM140Q9NV12 185 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 DLL1O00548 723 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 PQLC2Q6ZP29 291 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 CACNA1DQ01668 2161 aa15.25■□□□□ 0.03
CNTNAP3-204ENST00000377656 PPIAL4CA0A0B4J2A2 164 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 A8MWL6 223 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 APCSP02743 223 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 PPIAL4GP0DN37 164 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF137PP52743 207 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 HERVK_113P61574 105 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 MEF2BQ02080 365 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 CSRP2Q16527 193 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 FAM209AQ5JX71 171 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 WDFY1Q8IWB7 410 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 SCGB1D4Q6XE38 83 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 GPHA2Q96T91 129 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 MARCH11A6NNE9 402 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF660Q6AZW8 331 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 OVCH2Q7RTZ1 564 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 OR9G1Q8NH87 305 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 C5orf66Q9H5L9 145 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 PITPNC1Q9UKF7 332 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 NPIPB9F8W1W9 429 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 MUC1P15941 1255 aaPredicted RBP15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 GLIPR1P48060 266 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 RND2P52198 227 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF273Q14593 569 aa15.24■□□□□ 0.03
CNTNAP3-204ENST00000377656 COMPP49747 757 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 SLC35B1P78383 322 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 SELENOHQ8IZQ5 122 aaKnown RBP15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 RAMP1O60894 148 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 NDUFB4O95168 129 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 THY1P04216 161 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 ARF6P62330 175 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 UNQ5815/PRO19632Q6UWF5 114 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 RAB24Q969Q5 203 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 OR4C12Q96R67 309 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF703Q9H7S9 590 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF430Q9H8G1 570 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 MIOXQ9UGB7 285 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 IZUMO4Q1ZYL8 232 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM78Q5T7P6 136 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 LYRM7Q5U5X0 104 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 SLC35E4Q6ICL7 350 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 BPIFA4PQ86YQ2 179 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM30BQ3MIR4 351 aa15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 AKIRIN1Q9H9L7 192 aaPredicted RBP15.23■□□□□ 0.03
CNTNAP3-204ENST00000377656 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 ZNF729A6NN14 1252 aaPredicted RBP15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 PPOXP50336 477 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 ABHD12Q8N2K0 398 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 SIGLEC12Q96PQ1 595 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 AQP10Q96PS8 301 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 OR2A4O95047 310 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 PTBP3O95758 552 aaKnown RBP15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 DHRS11Q6UWP2 260 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 TMEM45BQ96B21 275 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 GUCD1Q96NT3 240 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 OR2A7Q96R45 310 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 A0A1W2PS18 150 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 PLAUP00749 431 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 TNFRSF9Q07011 255 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 MIC13Q5XKP0 118 aa15.22■□□□□ 0.03
CNTNAP3-204ENST00000377656 STPG3Q8N7X2 389 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms