RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 DPPA3Q6W0C5 159 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 SELENOHQ8IZQ5 122 aaKnown RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 OR5D13Q8NGL4 314 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 NEU4Q8WWR8 484 aaPredicted RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 GNPNAT1Q96EK6 184 aaPredicted RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 BSCL2Q96G97 398 aaPredicted RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 CLCC1Q96S66 551 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 MPC1Q9Y5U8 109 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 NPIPB11E5RHQ5 1161 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 H0YL77 283 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 J3QW42 95 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 EIF3GO75821 320 aaKnown RBP eCLIP10.3□□□□□ -0.76
VRK3-202ENST00000377011 SELEP16581 610 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 SNRPEP62304 92 aaKnown RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 AWAT1Q58HT5 328 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 IGSF11Q5DX21 431 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 NMSQ5H8A3 153 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 OR2T2Q6IF00 324 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 BRICD5Q6PL45 260 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 C1QL4Q86Z23 238 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 HIST1H2AAQ96QV6 131 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 PKIBQ9C010 78 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 EIF5A2Q9GZV4 153 aaKnown RBP10.3□□□□□ -0.76
VRK3-202ENST00000377011 MS4A5Q9H3V2 200 aa10.3□□□□□ -0.76
VRK3-202ENST00000377011 TANC2Q9HCD6 1990 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF732B4DXR9 585 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ACAA1P09110 424 aaPredicted RBP10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF44P15621 663 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 SLC25A16P16260 332 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF16P17020 682 aaPredicted RBP10.29□□□□□ -0.76
VRK3-202ENST00000377011 USF1P22415 310 aaPredicted RBP10.29□□□□□ -0.76
VRK3-202ENST00000377011 GCH1P30793 250 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 HAAOP46952 286 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 DSCR9P59020 149 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 VAMP2P63027 116 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ID3Q02535 119 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 NHLH2Q02577 135 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF880Q6PDB4 577 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF573Q86YE8 665 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 SLAMF9Q96A28 289 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ZNF251Q9BRH9 671 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 CABLES2Q9BTV7 478 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 SEBOXQ9HB31 216 aaPredicted RBP10.29□□□□□ -0.76
VRK3-202ENST00000377011 DYSFO75923 2080 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 ATRQ13535 2644 aa10.29□□□□□ -0.76
VRK3-202ENST00000377011 M0R036 132 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 SNRNP70P08621 437 aaKnown RBP10.28□□□□□ -0.76
VRK3-202ENST00000377011 RAB5AP20339 215 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 IL24Q13007 206 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 CLINT1Q14677 625 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 MOB1BQ7L9L4 216 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 ZFP82Q8N141 532 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 TMEM252Q8N6L7 170 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 OR5P3Q8WZ94 311 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 FGF23Q9GZV9 251 aaPredicted RBP10.28□□□□□ -0.76
VRK3-202ENST00000377011 MTCH1Q9NZJ7 389 aa10.28□□□□□ -0.76
VRK3-202ENST00000377011 IGSF23A1L1A6 192 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 ANKRD30BLA7E2S9 258 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 DEGS1O15121 323 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 MLNRO43193 412 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 TIMM8AO60220 97 aaPredicted RBP10.27□□□□□ -0.76
VRK3-202ENST00000377011 ZNF205O95201 554 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 IFNA17P01571 189 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 KITLGP21583 273 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 MDH2P40926 338 aaKnown RBP10.27□□□□□ -0.76
VRK3-202ENST00000377011 GPM6AP51674 278 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 SPIN3Q5JUX0 258 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 PRIMA1Q86XR5 153 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 GAPTQ8N292 157 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 HSD17B11Q8NBQ5 300 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 TCTEX1D2Q8WW35 142 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 RDH5Q92781 318 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 YAE1D1Q9NRH1 226 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 KIAA1456Q9P272 454 aa10.27□□□□□ -0.76
VRK3-202ENST00000377011 A0A1B0GU03 582 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 FAM24AA6NFZ4 105 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 CD300LBA8K4G0 201 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 ADAM20O43506 726 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 CD5LO43866 347 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 DFFBO76075 338 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 SCTP09683 121 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 ATP6V0CP27449 155 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 POLR2GP62487 172 aaKnown RBP eCLIP10.27□□□□□ -0.77
VRK3-202ENST00000377011 GNG3P63215 75 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 HLA-DRB3P79483 266 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 HERPUD1Q15011 391 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 TMEM182Q6ZP80 229 aaPredicted RBP10.27□□□□□ -0.77
VRK3-202ENST00000377011 IL17RELQ6ZVW7 336 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 OR2G3Q8NGZ4 309 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 FAM213BQ8TBF2 198 aa10.27□□□□□ -0.77
VRK3-202ENST00000377011 MRPL30Q8TCC3 161 aaKnown RBP10.27□□□□□ -0.77
VRK3-202ENST00000377011 NDUFS8O00217 210 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
VRK3-202ENST00000377011 HBE1P02100 147 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms