RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 HINT1P49773 126 aaPredicted RBP10.87□□□□□ -0.67
VPS13A-204ENST00000376634 CACNG7P62955 275 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 ADRA2AP08913 450 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 SPINK2P20155 84 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 FBXW9Q5XUX1 488 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 CCL28Q9NRJ3 127 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 C3AR1Q16581 482 aa10.87□□□□□ -0.67
VPS13A-204ENST00000376634 DENND4CQ5VZ89 1909 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 SERF2P84101 59 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF418Q8TF45 676 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-204ENST00000376634 KIR2DL4Q99706 377 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 OR52M1Q8NGK5 317 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 ASPDHA6ND91 283 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 WNT5BQ9H1J7 359 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 HOXB3P14651 431 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-204ENST00000376634 LYZL2Q7Z4W2 148 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF56Q15929 161 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 IBA57Q5T440 356 aaKnown RBP10.86□□□□□ -0.67
VPS13A-204ENST00000376634 MDP1Q86V88 176 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 OR10AC1Q8NH08 325 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 HPRT1P00492 218 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 LIFP15018 202 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 C9orf62Q8N4C0 152 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 FOLR2P14207 255 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 CLPPQ16740 277 aaPredicted RBP10.86□□□□□ -0.67
VPS13A-204ENST00000376634 SHISA5Q8N114 240 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 PXMP4Q9Y6I8 212 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 B4E171 279 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 SMIM13P0DJ93 91 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 RPL8P62917 257 aaKnown RBP10.86□□□□□ -0.67
VPS13A-204ENST00000376634 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 PMCHL2Q9BQD1 86 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 WDR54Q9H977 334 aa10.86□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 PRELID3AQ96N28 172 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 A0A1W2PQD3 144 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SELENOTP62341 195 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 OR10AG1Q8NH19 301 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 FAM216AQ8WUB2 273 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 PGLYRP4Q96LB8 373 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 FOXC2Q99958 501 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SMOC1Q9H4F8 434 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SF3B6Q9Y3B4 125 aaKnown RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 DDA1Q9BW61 102 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 TET2Q6N021 2002 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 H0Y980 276 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SLC25A17O43808 307 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 FAM209BQ5JX69 171 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF385CQ66K41 422 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SH2D5Q6ZV89 423 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 IGHV1OR15-9A0A0B4J2B8 117 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SUMO2P61956 95 aaKnown RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 MEF2BQ02080 365 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 NKG7Q16617 165 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 MESTQ5EB52 335 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 CCL19Q99731 98 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 IGHV5-10-1A0A0J9YXX1 117 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 RPL36A-HNRNPH2H7BZ11 118 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 RBM11P57052 281 aaKnown RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 CBLN3Q6UW01 205 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 WDR34Q96EX3 536 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
VPS13A-204ENST00000376634 DCTN5Q9BTE1 182 aa10.85□□□□□ -0.67
VPS13A-204ENST00000376634 UCNP55089 124 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 GPR82Q96P67 336 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 NEU1Q99519 415 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 IGKV3OR2-268A0A0C4DH90 116 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 ANOS1P23352 680 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CLDN14O95500 239 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 DLL1O00548 723 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 KCNAB3O43448 404 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 FAM106AQ4KMX7 169 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 GPX1P07203 203 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 MVDP53602 400 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 ZNF506Q5JVG8 444 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 ATG4DQ86TL0 474 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-204ENST00000376634 TMEM101Q96IK0 257 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 GAPDHP04406 335 aaKnown RBP10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CELA2BP08218 269 aaPredicted RBP10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CT62P0C5K7 136 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 RHOVQ96L33 236 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 PCDH15Q96QU1 1955 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 NPFFO15130 113 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CXCL3P19876 107 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 RTN4RQ9BZR6 473 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 PRDX2P32119 198 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 PAPPA-AS1Q5QFB9 102 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 JKAMPQ9P055 326 aa10.84□□□□□ -0.67
VPS13A-204ENST00000376634 CTGFP29279 349 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms