RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 LYRM2Q9NU23 88 aaPredicted RBP11.64□□□□□ -0.55
C9orf47-203ENST00000375851 YTHDF2Q9Y5A9 579 aaKnown RBP11.64□□□□□ -0.55
C9orf47-203ENST00000375851 DNASE2O00115 360 aaPredicted RBP11.63□□□□□ -0.55
C9orf47-203ENST00000375851 WNT9BO14905 357 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 COL8A1P27658 744 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 SHISA5Q8N114 240 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 IDI2-AS1Q9NZ38 188 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 SRSF10O75494 262 aaKnown RBP11.63□□□□□ -0.55
C9orf47-203ENST00000375851 TMEM187Q14656 261 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 IQCJQ1A5X6 159 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
C9orf47-203ENST00000375851 SIRT7Q9NRC8 400 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 MPDU1O75352 247 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 CRISP2P16562 243 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 FAM27E3Q08E93 113 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
C9orf47-203ENST00000375851 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 NAGKQ9UJ70 344 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 JPT1Q9UK76 154 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 A0A087WV48 116 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 FAM90A26D6RGX4 464 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 MST1P26927 711 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 SSTR5P35346 364 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 DRAM1Q8N682 238 aa11.63□□□□□ -0.55
C9orf47-203ENST00000375851 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 RHBDL1O75783 438 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 SNRPCP09234 159 aaKnown RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 AMTP48728 403 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 GUCA2BQ16661 112 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 LILRB1Q8NHL6 650 aaPredicted RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 VAMP8Q9BV40 100 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 C1QTNF5Q9BXJ0 243 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 TMEM140Q9NV12 185 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 SBF1O95248 1867 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 CEACAM18A8MTB9 384 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 ZNF253O75346 499 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 ABCA1O95477 2261 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 NTN3O00634 580 aaPredicted RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 S1PR2O95136 353 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 TNFRSF9Q07011 255 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 NCMAPQ5T1S8 102 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 HCP5Q6MZN7 132 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 MMD2Q8IY49 270 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 MYO7BQ6PIF6 2116 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 FAM74A7A6NL05 159 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 IFNL4K9M1U5 179 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 SMPD2O60906 423 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 P01737 135 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 IGFBP3P17936 291 aaPredicted RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 HSPE1P61604 102 aaKnown RBP11.62□□□□□ -0.55
C9orf47-203ENST00000375851 ARTNQ5T4W7 220 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 TP53RKQ96S44 253 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 TMEM204Q9BSN7 226 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 DEPPQ9NTK1 212 aa11.62□□□□□ -0.55
C9orf47-203ENST00000375851 HYPMO75409 117 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 MRPL54Q6P161 138 aaKnown RBP11.61□□□□□ -0.55
C9orf47-203ENST00000375851 POC1AQ8NBT0 407 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 WNK2Q9Y3S1 2297 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 SLC25A17O43808 307 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 ZG16O60844 167 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 NEURL1O76050 574 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 COX19Q49B96 90 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 LDLRAD3Q86YD5 345 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 OR5R1Q8NH85 324 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 F5H697 171 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 EFNB1P98172 346 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 KCNMB2Q9Y691 235 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 SIP14410 1827 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 LHX2P50458 406 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 PSG7Q13046 419 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 C5orf17Q8NAS9 161 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 PAXXQ9BUH6 204 aa11.61□□□□□ -0.55
C9orf47-203ENST00000375851 IGSF23A1L1A6 192 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 SH2D7A6NKC9 451 aaPredicted RBP11.6□□□□□ -0.55
C9orf47-203ENST00000375851 SIGLEC5O15389 551 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 LINC00869P0C866 280 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 CLDN18P56856 261 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
C9orf47-203ENST00000375851 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 THADAQ6YHU6 1953 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 J3QRE1 110 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 CD8AP01732 235 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 USF1P22415 310 aaPredicted RBP11.6□□□□□ -0.55
C9orf47-203ENST00000375851 SELENOTP62341 195 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 MEF2BQ02080 365 aaPredicted RBP11.6□□□□□ -0.55
C9orf47-203ENST00000375851 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
C9orf47-203ENST00000375851 CLEC2AQ6UVW9 174 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms