RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SLC35E3Q7Z769 313 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 WFIKKN1Q96NZ8 548 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 RBM7Q9Y580 266 aaKnown RBP11.73□□□□□ -0.53
MSH5-202ENST00000375740 TFF1P04155 84 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 HSPB1P04792 205 aaKnown RBP11.73□□□□□ -0.53
MSH5-202ENST00000375740 ZNF506Q5JVG8 444 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 ALKBH2Q6NS38 261 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 LRP11Q86VZ4 500 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 SLC25A15Q9Y619 301 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 SVILO95425 2214 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 A0A0G2JRQ6 117 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 C1QTNF9BB2RNN3 333 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 KLK10O43240 276 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 CST7O76096 145 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 SERPINE2P07093 398 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 VAMP2P63027 116 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 ACP7Q6ZNF0 438 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 RPRMLQ8N4K4 120 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 RNASEH2CQ8TDP1 164 aaKnown RBP11.73□□□□□ -0.53
MSH5-202ENST00000375740 GPR146Q96CH1 333 aa11.73□□□□□ -0.53
MSH5-202ENST00000375740 CACNA1GO43497 2377 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 CLDN34H7C241 214 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 RND2P52198 227 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 ABHD14BQ96IU4 210 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 FAM215AQ9Y5M1 114 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 KIAA2026Q5HYC2 2103 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 HEATR1Q9H583 2144 aaKnown RBP11.72□□□□□ -0.53
MSH5-202ENST00000375740 ZNF292O60281 2723 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 A0A1B0GU03 582 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 CHST1O43916 411 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 TMEM50AO95807 157 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 AESQ08117 197 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 MBNL2Q5VZF2 373 aaKnown RBP11.72□□□□□ -0.53
MSH5-202ENST00000375740 ODF3L1Q8IXM7 274 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 RBMXL3Q8N7X1 1067 aaKnown RBP11.72□□□□□ -0.53
MSH5-202ENST00000375740 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 KCNS2Q9ULS6 477 aa11.72□□□□□ -0.53
MSH5-202ENST00000375740 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 PLA2G5P39877 138 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 ZNF83P51522 516 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 TDGF1P3P51864 188 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 ZNF474Q6S9Z5 364 aaPredicted RBP11.71□□□□□ -0.53
MSH5-202ENST00000375740 OR5C1Q8NGR4 320 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 LYRM2Q9NU23 88 aaPredicted RBP11.71□□□□□ -0.53
MSH5-202ENST00000375740 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 GNG13Q9P2W3 67 aa11.71□□□□□ -0.53
MSH5-202ENST00000375740 IGKV1-39P01597 117 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 IGKV1D-39P04432 117 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.54
MSH5-202ENST00000375740 NBL1P41271 181 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 OR3A1P47881 315 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 THNSL2Q86YJ6 484 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 GAB2Q9UQC2 676 aa11.71□□□□□ -0.54
MSH5-202ENST00000375740 XKRY2A2RUG3 117 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 ZFP92A6NM28 416 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 PITX3O75364 302 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 WNT2P09544 360 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 TLE1Q04724 770 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 FAM53AQ6NSI3 398 aaPredicted RBP11.7□□□□□ -0.54
MSH5-202ENST00000375740 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 FAM169BQ8N8A8 192 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 METRNQ9UJH8 293 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 DSPP15924 2871 aaKnown RBP11.7□□□□□ -0.54
MSH5-202ENST00000375740 C12orf77C9JDV5 145 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 GZMHP20718 246 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 PAX9P55771 341 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 PAX5Q02548 391 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 MSMPQ1L6U9 139 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 Q6ZRM9 215 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
MSH5-202ENST00000375740 TRBV24-1A0A075B6N3 115 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 M0R1B8 84 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 CYB5R3P00387 301 aaPredicted RBP11.69□□□□□ -0.54
MSH5-202ENST00000375740 DYNLT3P51808 116 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 ZNF585BQ52M93 769 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 NCR3LG1Q68D85 454 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 DRAM1Q8N682 238 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 OR52L2PQ8NGH6 319 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 GALMQ96C23 342 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 COQ2Q96H96 371 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 RNF115Q9Y4L5 304 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 SPENQ96T58 3664 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms