RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NPPCP23582 126 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 CYB561P49447 251 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 FFAR4Q5NUL3 377 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 LINC00596Q86U02 117 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 OR2T10Q8NGZ9 312 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 HES7Q9BYE0 225 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 DMXL2Q8TDJ6 3036 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 TMEM250H0YL14 139 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 LURAP1Q96LR2 239 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 ASCL3Q9NQ33 180 aa11.87□□□□□ -0.51
CLCNKA-202ENST00000375692 MGAQ8IWI9 3026 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 PIGBOS1A0A0B4J2F0 54 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 A0A1B0GUS0 222 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 EREGO14944 169 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 WNT2P09544 360 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 FOSL1P15407 271 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 RPL30P62888 115 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 ACTL10Q5JWF8 245 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 NOL4LQ96MY1 436 aaPredicted RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 LINC00470Q9BZP3 86 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 LRP5LA4QPB2 252 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 NPIPB11E5RHQ5 1161 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 IGHEP01854 428 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 CRYAAP02489 173 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 SELEP16581 610 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 CEBPDP49716 269 aaPredicted RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 LHX2P50458 406 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 ZNF124Q15973 351 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 C3AR1Q16581 482 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 WDR86Q86TI4 376 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 MRPL41Q8IXM3 137 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 OR1L1Q8NH94 360 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 THOC3Q96J01 351 aaKnown RBP11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 TIMM9Q9Y5J7 89 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 BOD1L1Q8NFC6 3051 aa11.86□□□□□ -0.51
CLCNKA-202ENST00000375692 OR5B21A6NL26 309 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 FAM166BA8MTA8 275 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 C21orf140B9A014 251 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 ZG16O60844 167 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 GCGP01275 180 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 PDLIM4P50479 330 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 LINC00205P59089 165 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 PLP2Q04941 152 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 ACY3Q96HD9 319 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 MPC1Q9Y5U8 109 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 PTPRBP23467 1997 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 COX5BP10606 129 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 NHLH1Q02575 133 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 NUFIP2Q7Z417 695 aaKnown RBP11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 C5orf30Q96GV9 206 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 HSPB7Q9UBY9 170 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 CEP295Q9C0D2 2601 aa11.85□□□□□ -0.51
CLCNKA-202ENST00000375692 ODAMA1E959 279 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 PMS2P5A8MQ11 134 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 CLDN18P56856 261 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 UBE2G2P60604 165 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 PAX5Q02548 391 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 GCSAMLQ5JQS6 135 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 FAM78BQ5VT40 261 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 APH1AQ96BI3 265 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 NEIL1Q96FI4 390 aaPredicted RBP11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 TMEM147Q9BVK8 224 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 TP53TG5Q9Y2B4 290 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 PGPEP1LA6NFU8 196 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 J3QT63 122 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 TCAPO15273 167 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 S1PR2O95136 353 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 WT1P19544 449 aaPredicted RBP11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 ARR3P36575 388 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 DCAF10Q5QP82 559 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 BTNL3Q6UXE8 466 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 SCCPDHQ8NBX0 429 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 TMEM18Q96B42 140 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 ANAPC16Q96DE5 110 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 DERL1Q9BUN8 251 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 OR2D2Q9H210 308 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
CLCNKA-202ENST00000375692 SPTBN4Q9H254 2564 aa11.83□□□□□ -0.51
CLCNKA-202ENST00000375692 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 C11orf94C9JXX5 98 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 FAM90A26D6RGX4 464 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 CDIPTO14735 213 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 SERPINA7P05543 415 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 TEX38Q6PEX7 206 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 TMEM256Q8N2U0 113 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 OR10P1Q8NGE3 313 aa11.83□□□□□ -0.52
CLCNKA-202ENST00000375692 OR52L2PQ8NGH6 319 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms