RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FADS6Q8N9I5 356 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 MRPL18Q9H0U6 180 aaKnown RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 PARLQ9H300 379 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 IL36GQ9NZH8 169 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 FGF16O43320 207 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 CLDN14O95500 239 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 PRDX2P32119 198 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 REG1AP05451 166 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 LGALS4P56470 323 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 FAM131CQ96AQ9 280 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 FAM122AQ96E09 287 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 FAM117AQ9C073 453 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 ASCL3Q9NQ33 180 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 PI4KAP42356 2102 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 IGKV1-27A0A075B6S5 117 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 HTR1DP28221 377 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 OTX1P32242 354 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 SUPT4H1P63272 117 aaKnown RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 PLAURQ03405 335 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 TRIOBPQ9H2D6 2365 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 UCP2P55851 309 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM251Q8N6I4 163 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 OR4X1Q8NH49 305 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 GLRX2Q9NS18 164 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 ESPL1Q14674 2120 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 MYO7BQ6PIF6 2116 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 COL4A3Q01955 1670 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 C2orf16Q68DN1 1984 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 RAMP3O60896 148 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 TEPPQ6URK8 271 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 PQLC2Q6ZP29 291 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 KLHDC1Q8N7A1 406 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 SAP30LQ9HAJ7 183 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 HEATR5AQ86XA9 2040 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 LOC389332A0A1B0GUA5 103 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 EFNA2O43921 213 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 GFRALQ6UXV0 394 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 WDFY1Q8IWB7 410 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 DRAM1Q8N682 238 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 OR1L4Q8NGR5 311 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 FGFBP3Q8TAT2 258 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 RCC1LQ96I51 464 aaKnown RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 WDR61Q9GZS3 305 aaKnown RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 EIF4E3Q8N5X7 224 aaKnown RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF441Q8N8Z8 693 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF524Q96C55 264 aa5.58□□□□□ -1.52
SMC1A-202ENST00000375340 GMPPAQ96IJ6 420 aaPredicted RBP5.58□□□□□ -1.52
SMC1A-202ENST00000375340 THADAQ6YHU6 1953 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 NEURL1O76050 574 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PAX5Q02548 391 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PMS2CLQ68D20 193 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TCF23Q7RTU1 214 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM56Q96MV1 263 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SIGLEC12Q96PQ1 595 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CCL13Q99616 98 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SLX1AQ9BQ83 275 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 E9PLN8 166 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 ZNF253O75346 499 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CLEC3BP05452 202 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 NPY1RP25929 384 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PRNTQ86SH4 94 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 NFAM1Q8NET5 270 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SFRP2Q96HF1 295 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 IMMP2LQ96T52 175 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 NPCDR1Q9BY65 106 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PRDM14Q9GZV8 571 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 GAL3ST2Q9H3Q3 398 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 H3BTX0 84 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PRRG2O14669 202 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 HIST1H1BP16401 226 aaKnown RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 BCL2L2Q92843 193 aaPredicted RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 OR2V2Q96R30 315 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CXCL1P09341 107 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 ARL16Q0P5N6 197 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 ELOBQ15370 118 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM183AQ8IXX5 376 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 STARD4Q96DR4 205 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 GALNT14Q96FL9 552 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SGK494Q96LW2 274 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PILRBQ9UKJ0 227 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 FAM90A27PA6NNH2 459 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 IGHV3-48P01763 117 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 ADH4P08319 380 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 FGF5P12034 268 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CFHR1Q03591 330 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 OR8A1Q8NGG7 326 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 RNF2Q99496 336 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 OR6C3Q9NZP0 311 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 LDLRAD4O15165 306 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 LINC00271P0C7V0 271 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 CBLN1P23435 193 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 SERF2P84101 59 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TRIP6Q15654 476 aaKnown RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 S100A7AQ86SG5 101 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 MRPL13Q9BYD1 178 aaKnown RBP5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM167BQ9NRX6 74 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 TMEM140Q9NV12 185 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 hADV38S2A0JD32 116 aa5.57□□□□□ -1.52
SMC1A-202ENST00000375340 AMY1AP04745 511 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms