RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 BBIP1A8MTZ0 92 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 CXCL13O43927 109 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 RAMP1O60894 148 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 SMIM17P0DL12 118 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 IGFBP3P17936 291 aaPredicted RBP7.53□□□□□ -1.2
UBR4-201ENST00000375218 PMAIP1Q13794 54 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 TMEM241Q24JQ0 296 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 EIF5AL1Q6IS14 154 aaKnown RBP7.53□□□□□ -1.2
UBR4-201ENST00000375218 CA10Q9NS85 328 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 TMEM74BQ9NUR3 256 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 KCNIP1Q9NZI2 227 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 RPL36Q9Y3U8 105 aaKnown RBP7.53□□□□□ -1.2
UBR4-201ENST00000375218 TACC2O95359 2948 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 RPL27P61353 136 aaKnown RBP7.53□□□□□ -1.2
UBR4-201ENST00000375218 DCDP81605 110 aaKnown RBP7.53□□□□□ -1.2
UBR4-201ENST00000375218 PMVKQ15126 192 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 ZNRF2Q8NHG8 242 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 ASF1AQ9Y294 204 aa7.53□□□□□ -1.2
UBR4-201ENST00000375218 BUB3O43684 328 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 FGF6P10767 208 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 RAB5AP20339 215 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 TSFMP43897 325 aaKnown RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 FABP6P51161 128 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 CATR1Q13166 79 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 HEXA-AS1Q9H8Q6 139 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 ACER3Q9NUN7 267 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 TDRD6O60522 2096 aaKnown RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 A1L4Q6 167 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 C4orf51C9J302 202 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 FAM106CPP0CH98 169 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 ZNF19P17023 458 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 HILS1P60008 231 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 ACSF3Q4G176 576 aaPredicted RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 FAM106AQ4KMX7 169 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 RBMXL3Q8N7X1 1067 aaKnown RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 NOX3Q9HBY0 568 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 HS3ST3B1Q9Y662 390 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 PSG2P11465 335 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 BLVRBP30043 206 aaPredicted RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 CLDN17P56750 224 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 EIF5AP63241 154 aaKnown RBP7.52□□□□□ -1.21
UBR4-201ENST00000375218 PIGFQ07326 219 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 MMDQ15546 238 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 ZNF678Q5SXM1 525 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
UBR4-201ENST00000375218 F5P12259 2224 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 A0A087WUU8 490 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 CDRT1O95170 752 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 H2BFMP0C1H6 154 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 EDNRAP25101 427 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 DLX1P56177 255 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 RAB35Q15286 201 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TNFAIP8L2Q6P589 184 aaPredicted RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 ZCCHC24Q8N2G6 241 aaKnown RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 IQCF1Q8N6M8 205 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 DCAF4L2Q8NA75 395 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TFAP2CQ92754 450 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 PHYHIPLQ96FC7 376 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 POMKQ9H5K3 350 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ZDHHC11Q9H8X9 412 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TMEM45AQ9NWC5 275 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 IFITM5A6NNB3 132 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 RIIAD1A6NNX1 92 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TMEM178BH3BS89 294 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 CXorf1O96002 111 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 RFPL3SP0C7P2 107 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 LOXP28300 417 aaPredicted RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 CD38P28907 300 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 GUCA1AP43080 201 aaPredicted RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 APOC4P55056 127 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ISL1P61371 349 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 MEF2DQ14814 521 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TMEM229BQ8NBD8 167 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 TMEM54Q969K7 222 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 OR8D2Q9GZM6 311 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 NRN1Q9NPD7 142 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 PCNX3Q9H6A9 2034 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 BORCS7-ASMTA0A0B4J1R7 106 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ODAMA1E959 279 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 MSGN1A6NI15 193 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ZIC3O60481 467 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 GLCCI1Q86VQ1 547 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 PP6455Q8WZ26 134 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ZNF703Q9H7S9 590 aaPredicted RBP7.51□□□□□ -1.21
UBR4-201ENST00000375218 GPR84Q9NQS5 396 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 KMT2EQ8IZD2 1858 aa7.51□□□□□ -1.21
UBR4-201ENST00000375218 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 OR2H2O95918 312 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 IL3P08700 152 aa7.5□□□□□ -1.21
UBR4-201ENST00000375218 ZNF705DP0CH99 300 aaPredicted RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 ZNF705BP0CI00 300 aaPredicted RBP7.5□□□□□ -1.21
UBR4-201ENST00000375218 EVI2AP22794 236 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms