RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 OR3A1P47881 315 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 ATP6V1FQ16864 119 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
UBXN11-204ENST00000374217 ABHD3Q8WU67 409 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 GPR146Q96CH1 333 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 PARLQ9H300 379 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 PSENENQ9NZ42 101 aa12.66□□□□□ -0.38
UBXN11-204ENST00000374217 A0A1W2PPQ1 181 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 ZNHIT1O43257 154 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 LCATP04180 440 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 CD55P08174 381 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 PAFAH1B2P68402 229 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 PHYHD1Q5SRE7 291 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBXN11-204ENST00000374217 TMEM208Q9BTX3 173 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
UBXN11-204ENST00000374217 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
UBXN11-204ENST00000374217 KIAA1549Q9HCM3 1950 aa12.65□□□□□ -0.38
UBXN11-204ENST00000374217 NPIPB11E5RHQ5 1161 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 SOX15O60248 233 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 FGF8P55075 233 aaPredicted RBP12.65□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM267Q0VDI3 215 aaPredicted RBP12.65□□□□□ -0.39
UBXN11-204ENST00000374217 FOXL1Q12952 345 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 PLCXD3Q63HM9 321 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 SSX7Q7RTT5 188 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 OR2AE1Q8NHA4 323 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 SPSB4Q96A44 273 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 SNRNP40Q96DI7 357 aaKnown RBP12.65□□□□□ -0.39
UBXN11-204ENST00000374217 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.39
UBXN11-204ENST00000374217 TRIB1Q96RU8 372 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 VSIRQ9H7M9 311 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 CCL28Q9NRJ3 127 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.39
UBXN11-204ENST00000374217 BOD1L1Q8NFC6 3051 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ATMQ13315 3056 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TLN1Q9Y490 2541 aaKnown RBP12.64□□□□□ -0.39
UBXN11-204ENST00000374217 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TRAV9-1A0A075B6T8 112 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 IGKV1D-13A0A0B4J2D9 117 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ZNF716A6NP11 495 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 CD300LBA8K4G0 201 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TMPRSS2O15393 492 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 IGKV1-13P0DP09 117 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 MDKP21741 143 aaPredicted RBP12.64□□□□□ -0.39
UBXN11-204ENST00000374217 G0S2P27469 103 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 FGF12P61328 243 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 PCBD1P61457 104 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 LY6DQ14210 128 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM249Q2WGJ8 235 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ZNF774Q6NX45 483 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 AAED1Q7RTV5 226 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ARL6IP6Q8N6S5 226 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ZNF611Q8N823 705 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 NEIL1Q96FI4 390 aaPredicted RBP12.64□□□□□ -0.39
UBXN11-204ENST00000374217 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 OR2W1Q9Y3N9 320 aa12.64□□□□□ -0.39
UBXN11-204ENST00000374217 GCN1Q92616 2671 aaKnown RBP12.64□□□□□ -0.39
UBXN11-204ENST00000374217 TNFSF13O75888 250 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 GYPAP02724 150 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 ESDP10768 282 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 RPL15P61313 204 aaKnown RBP12.63□□□□□ -0.39
UBXN11-204ENST00000374217 DAZAP2Q15038 168 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-204ENST00000374217 ZNF324BQ6AW86 544 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 CPT1CQ8TCG5 803 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 MS4A10Q96PG2 267 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 PXMP4Q9Y6I8 212 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 SVILO95425 2214 aa12.63□□□□□ -0.39
UBXN11-204ENST00000374217 ASH1LQ9NR48 2969 aaKnown RBP12.63□□□□□ -0.39
UBXN11-204ENST00000374217 MLNRO43193 412 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 PPP1CBP62140 327 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 GFRALQ6UXV0 394 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 TEX43Q6ZNM6 134 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 NECAP1Q8NC96 275 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 GMPPAQ96IJ6 420 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 IGKV3D-15A0A087WSY6 115 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 DEGS1O15121 323 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 PDE6DO43924 150 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 MRPL33O75394 65 aaKnown RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 HPRT1P00492 218 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 SCTP09683 121 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 ELLP55199 621 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 RPP25LQ8N5L8 163 aaKnown RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 ZIC4Q8N9L1 334 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 LIN7CQ9NUP9 197 aaKnown RBP12.62□□□□□ -0.39
UBXN11-204ENST00000374217 TMEM38BQ9NVV0 291 aa12.62□□□□□ -0.39
UBXN11-204ENST00000374217 SPTA1P02549 2419 aa12.61□□□□□ -0.39
UBXN11-204ENST00000374217 A0A0G2JRQ6 117 aa12.61□□□□□ -0.39
UBXN11-204ENST00000374217 H3BP45 60 aa12.61□□□□□ -0.39
UBXN11-204ENST00000374217 GNB2P62879 340 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms