RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GOSR1O95249 250 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OR4A8P0C604 315 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 SFTA3P0C7M3 94 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PPIAL4FP0DN26 164 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF16P17020 682 aaPredicted RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 CA7P43166 264 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OR2B8PP59922 312 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 MRPS11P82912 194 aaKnown RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 RELBQ01201 579 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 ADIPOQQ15848 244 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 RTL8BQ17RB0 113 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 RNF212Q495C1 297 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM74A3Q4VXF1 159 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 LRRC10Q5BKY1 277 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 NCMAPQ5T1S8 102 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 HEPN1Q6WQI6 88 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 LINC00311Q8N616 119 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 C15orf54Q8N8G6 183 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 HSD17B11Q8NBQ5 300 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 CLRN3Q8NCR9 226 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OR52L2PQ8NGH6 319 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OR4A16Q8NH70 328 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OR4A5Q8NH83 315 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 VSTM2AQ8TAG5 236 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 OSR1Q8TAX0 266 aaPredicted RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF596Q8TC21 504 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM190Q8WZ59 177 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 SNRNP40Q96DI7 357 aaKnown RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PCGF1Q9BSM1 259 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 SMIM3Q9BZL3 60 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 WDR61Q9GZS3 305 aaKnown RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 EIF5A2Q9GZV4 153 aaKnown RBP7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 MAGT1Q9H0U3 335 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 SAP30LQ9HAJ7 183 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 WFDC1Q9HC57 220 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PRNDQ9UKY0 176 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 PPIAL4AQ9Y536 164 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM186AA6NE01 2351 aa7.24□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A087WWC5 75 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A087X0M5 115 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A1B0GX30 115 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 hCG_1809904A0A1W2PP81 198 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A1W2PPE2 198 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A1W2PR64 198 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 A0A1W2PRV1 198 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 CYB5BO43169 146 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 KCNAB3O43448 404 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 KRASP01116 189 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 CD3EP07766 207 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 MC5RP33032 325 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 CD80P33681 288 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 PPP1CCP36873 323 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 BTN1A1Q13410 526 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 RAB31Q13636 194 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 CLINT1Q14677 625 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM41BQ5BJD5 291 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF506Q5JVG8 444 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 SP5Q6BEB4 398 aaPredicted RBP7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 SLC25A48Q6ZT89 311 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 ZNF525Q8N782 197 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 TAF15Q92804 592 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 RAB1CQ92928 201 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM186Q96B77 213 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 R3HDM4Q96D70 268 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 C19orf24Q9BVV8 132 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 RPUSD1Q9UJJ7 312 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 PSG11Q9UQ72 335 aa7.23□□□□□ -1.25
SNRNP40-202ENST00000373720 DPRXA6NFQ7 191 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM157AC9JC47 383 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM178BH3BS89 294 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TGOLN2O43493 480 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 NDUFB3O43676 98 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 CST7O76096 145 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM50AO95807 157 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 FOLR2P14207 255 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 IL3RAP26951 378 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 SSTR5P35346 364 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 COMPP49747 757 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 EDDM3BP56851 147 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 DLK1P80370 383 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 FLI1Q01543 452 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 NHLH1Q02575 133 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TLE1Q04724 770 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 BSPH1Q075Z2 132 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 SLC38A11Q08AI6 406 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 SOHLH1Q5JUK2 328 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM182Q6ZP80 229 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 Q6ZRM9 215 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 SLC35E3Q7Z769 313 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 LRP11Q86VZ4 500 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 OR5B3Q8NH48 314 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 NANPQ8TBE9 248 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 FAM213BQ8TBF2 198 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 DDB2Q92466 427 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 CYYR1Q96J86 154 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 BTF3L4Q96K17 158 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 GAFA1Q96PS6 74 aa7.22□□□□□ -1.25
SNRNP40-202ENST00000373720 TMEM204Q9BSN7 226 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms