RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 SUMF2Q8NBJ7 301 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 OR2AJ1Q8NGZ0 328 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 C1orf147Q96MC9 270 aaPredicted RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 SMDT1Q9H4I9 107 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM106BQ9NUM4 274 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 A0A087WX48 190 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 FOXI3A8MTJ6 420 aaPredicted RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 DNPH1O43598 174 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 EFNA2O43921 213 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 YPEL1O60688 119 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 HYPMO75409 117 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 MPIG6BO95866 241 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 CLRN1P58418 232 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TAS2R46P59540 309 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 EFNB3Q15768 340 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 SPATA45Q537H7 98 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 LHFPL1Q86WI0 220 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 OR10G9Q8NGN4 311 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 APOBEC3DQ96AK3 386 aaPredicted RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 YPEL2Q96QA6 119 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM59Q9BXS4 323 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 DKK4Q9UBT3 224 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TNRC6BQ9UPQ9 1833 aaKnown RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 A0A0A6YYD4 124 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 IGHV2-26A0A0B4J1V2 119 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 KIAA1324LA8MWY0 1029 aaPredicted RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 RAMP1O60894 148 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 PSG2P11465 335 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 AMY2BP19961 511 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TSPOP30536 169 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 SUPT4H1P63272 117 aaKnown RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 PSG9Q00887 426 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 MRPL14Q6P1L8 145 aaKnown RBP7.01□□□□□ -1.29
GARNL3-201ENST00000373386 C19orf35Q6ZS72 473 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 OR2I1PQ8NGU4 316 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM54Q969K7 222 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 RARRES3Q9UL19 164 aa7.01□□□□□ -1.29
GARNL3-201ENST00000373386 OR2T8A6NH00 312 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 SLC22A20A6NK97 555 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 ZNF354AO60765 605 aaPredicted RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 NRASP01111 189 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 GAPDHP04406 335 aaKnown RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 CELA3AP09093 270 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 B4GALT1P15291 398 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 ZNF17P17021 662 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 IL15RAQ13261 267 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 RBPMS2Q6ZRY4 209 aaKnown RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 OR5AS1Q8N127 324 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM116Q8NCL8 245 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 RTBDNQ9BSG5 229 aaPredicted RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 TM2D1Q9BX74 207 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 FOXQ1Q9C009 403 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 MED29Q9NX70 200 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 A0A1W2PQM1 296 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 SOCS1O15524 211 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 SYNGR3O43761 229 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 GDF9O60383 454 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 SCRG1O75711 98 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 MMP9P14780 707 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 PMCHP20382 165 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 USF1P22415 310 aaPredicted RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 ATP6V0CP27449 155 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 RND2P52198 227 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 ARFRP1Q13795 201 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 RPL7L1Q6DKI1 246 aaKnown RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 Q6ZRG5 221 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 PP6455Q8WZ26 134 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 EMG1Q92979 244 aaKnown RBP7□□□□□ -1.29
GARNL3-201ENST00000373386 NUDT22Q9BRQ3 303 aa7□□□□□ -1.29
GARNL3-201ENST00000373386 MSTNO14793 375 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 HMGB3O15347 200 aaKnown RBP6.99□□□□□ -1.29
GARNL3-201ENST00000373386 JTBO76095 146 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 LMO1P25800 156 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 CTRLP40313 264 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 OPN5Q6U736 354 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM217Q8N7C4 229 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 OR51E1Q8TCB6 317 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 TMEM170AQ8WVE7 144 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 C1orf123Q9NWV4 160 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 PRSS50Q9UI38 385 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 RS1O15537 224 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 IGHG4P01861 327 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 TCTAP57738 103 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 HLA-BQ31612 363 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 OR8B12Q8NGG6 310 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 UHRF2Q96PU4 802 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 CDX2Q99626 313 aaPredicted RBP6.99□□□□□ -1.29
GARNL3-201ENST00000373386 ZDHHC11Q9H8X9 412 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 PATZ1Q9HBE1 687 aaKnown RBP6.99□□□□□ -1.29
GARNL3-201ENST00000373386 JKAMPQ9P055 326 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 POLR1DQ9Y2S0 133 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 PCNX3Q9H6A9 2034 aa6.99□□□□□ -1.29
GARNL3-201ENST00000373386 LY6G6EA0A0G2JKS1 128 aa6.98□□□□□ -1.29
GARNL3-201ENST00000373386 NPIPB5A8MRT5 1133 aa6.98□□□□□ -1.29
GARNL3-201ENST00000373386 F5H5K5 113 aa6.98□□□□□ -1.29
GARNL3-201ENST00000373386 PI3P19957 117 aa6.98□□□□□ -1.29
GARNL3-201ENST00000373386 RBMXP38159 391 aaKnown RBP6.98□□□□□ -1.29
GARNL3-201ENST00000373386 GPM6AP51674 278 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms