RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 DCTN5Q9BTE1 182 aa13.22□□□□□ -0.29
C9orf78-201ENST00000372447 MAGT1Q9H0U3 335 aa13.22□□□□□ -0.29
C9orf78-201ENST00000372447 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
C9orf78-201ENST00000372447 CREBBPQ92793 2442 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 KRBOX1C9JBD0 128 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 LGALS8O00214 317 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 MMP9P14780 707 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 SLC25A16P16260 332 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 GZMHP20718 246 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 EPHA1P21709 976 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 VAMP2P63027 116 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 NHLH2Q02577 135 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 MSMO1Q15800 293 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 CR1LQ2VPA4 569 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 ZNRF1Q8ND25 227 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 OR1S2Q8NGQ3 325 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 RNASE11Q8TAA1 199 aaKnown RBP13.21□□□□□ -0.29
C9orf78-201ENST00000372447 RFESDQ8TAC1 157 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 NARFLQ9H6Q4 476 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 LPAR3Q9UBY5 353 aa13.21□□□□□ -0.29
C9orf78-201ENST00000372447 A0A096LNT2 108 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 IGHV4-61A0A0C4DH41 118 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 FAM24AA6NFZ4 105 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 FSTL3O95633 263 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 CAV2P51636 162 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 EIF4EBP1Q13541 118 aaPredicted RBP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 TEX36Q5VZQ5 186 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 MARC2Q969Z3 335 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 C5orf30Q96GV9 206 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 LYRM2Q9NU23 88 aaPredicted RBP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 IGHV3-43A0A0B4J1X8 118 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 MEX3AA1L020 520 aaKnown RBP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 ZNF705EA8MWA4 302 aaPredicted RBP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 RNF223E7ERA6 249 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 WRBO00258 174 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 FBXO24O75426 580 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 IGKV1-5P01602 117 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 IGHV3-43DP0DP04 118 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 AKR1C2P52895 323 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 SAT2Q96F10 170 aaPredicted RBP13.2□□□□□ -0.3
C9orf78-201ENST00000372447 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
C9orf78-201ENST00000372447 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 IGSF23A1L1A6 192 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 CHST1O43916 411 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 NXPH3O95157 252 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 MUC1P15941 1255 aaPredicted RBP13.19□□□□□ -0.3
C9orf78-201ENST00000372447 SULT1A2P50226 295 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 Q6ZRM9 215 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 SDSLQ96GA7 329 aa13.19□□□□□ -0.3
C9orf78-201ENST00000372447 RAB19A4D1S5 217 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 KIAA1324LA8MWY0 1029 aaPredicted RBP13.18□□□□□ -0.3
C9orf78-201ENST00000372447 TNFRSF13BO14836 293 aaPredicted RBP13.18□□□□□ -0.3
C9orf78-201ENST00000372447 TMEM50AO95807 157 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 GYPAP02724 150 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 USF1P22415 310 aaPredicted RBP13.18□□□□□ -0.3
C9orf78-201ENST00000372447 EDDM3BP56851 147 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 CATR1Q13166 79 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 IZUMO4Q1ZYL8 232 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 TMEM155Q4W5P6 130 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 STUMQ69YW2 141 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 CIARTQ8N365 385 aaPredicted RBP13.18□□□□□ -0.3
C9orf78-201ENST00000372447 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 MAPK1IP1LQ8NDC0 245 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 CLDND2Q8NHS1 167 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 SMIM8Q96KF7 97 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 GINS3Q9BRX5 216 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 NCOR1P1Q9H4R4 102 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 OR6C3Q9NZP0 311 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
C9orf78-201ENST00000372447 LPAR6P43657 344 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 RPL30P62888 115 aaKnown RBP13.17□□□□□ -0.3
C9orf78-201ENST00000372447 LTC4SQ16873 150 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 TUSC1Q2TAM9 212 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 LYPD2Q6UXB3 125 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 EDARADDQ8WWZ3 215 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 AGMATQ9BSE5 352 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 PSG11Q9UQ72 335 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 MAST4O15021 2626 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 CELSR1Q9NYQ6 3014 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 NUDT19A8MXV4 375 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 MED6O75586 246 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 SEC11BP0C7V7 166 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 PAX9P55771 341 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 LMO4P61968 165 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 BAXQ07812 192 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 LOXL1Q08397 574 aaPredicted RBP13.17□□□□□ -0.3
C9orf78-201ENST00000372447 UQCC3Q6UW78 93 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 SPNS3Q6ZMD2 512 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 ZNF66Q6ZN08 573 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 FGFRL1Q8N441 504 aa13.17□□□□□ -0.3
C9orf78-201ENST00000372447 FAM216AQ8WUB2 273 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms