RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 EDDM3BP56851 147 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 RPL15P61313 204 aaKnown RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 HIST1H3AP68431 136 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SRYQ05066 204 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 BAXQ07812 192 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SLC38A11Q08AI6 406 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 IL24Q13007 206 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 IQCJQ1A5X6 159 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 RNF151Q2KHN1 245 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 LRRC75BQ2VPJ9 315 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM41BQ5BJD5 291 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 UNQ5815/PRO19632Q6UWF5 114 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 MRGPRGQ86SM5 289 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 FAM19A2Q8N3H0 131 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR10G4Q8NGN3 311 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR10G9Q8NGN4 311 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR10G7Q8NGN6 311 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR1F12Q8NHA8 337 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 RCHY1Q96PM5 261 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 PYGO2Q9BRQ0 406 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 PRRG4Q9BZD6 226 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OR2J1Q9GZK6 312 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 SMDT1Q9H4I9 107 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 OBP2AQ9NY56 170 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 CLEC1BQ9P126 229 aa4.57□□□□□ -1.68
ATG4A-204ENST00000372246 CHCHD2Q9Y6H1 151 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-204ENST00000372246 KIR2DL5BA0A0G2JN68 375 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 KIR2DL5BA0A0G2JPC4 375 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 hCG_38984A0A1B0GV85 526 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 BLACEA4D250 179 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CLEC18AA5D8T8 446 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CD300LBA8K4G0 201 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 DEFB108AA8MXU0 73 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 C11orf94C9JXX5 98 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 C5orf67F2Z3F1 127 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CXCL13O43927 109 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 NDUFB8O95169 186 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 IGHEP01854 428 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PNRC1Q12796 327 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 LTC4SQ16873 150 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 TPTE2P1Q5T6R2 138 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 LCN12Q6JVE5 192 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 KIR2DL5AQ8N109 375 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SLC25A45Q8N413 288 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CLEC18CQ8NCF0 446 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SPSB1Q96BD6 273 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 FAM234AQ9H0X4 552 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 TCFL5Q9UL49 500 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PTRH2Q9Y3E5 179 aaKnown RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 IGHV3-43A0A0B4J1X8 118 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SCO2A0A1W2PP80 73 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 C5orf49A4QMS7 147 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 NPIPB13A6NJU9 1138 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 NPIPB4C9JG80 1138 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM238C9JI98 176 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 M0QZ24 198 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 RRHO14718 337 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CCL25O15444 150 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 IGHV3-43DP0DP04 118 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 EN2P19622 333 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PMCHP20382 165 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CA6P23280 308 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CTSSP25774 331 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 COMPP49747 757 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 HINT1P49773 126 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 LHX2P50458 406 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 RAB7AP51149 207 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 RPL30P62888 115 aaKnown RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PSG7Q13046 419 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 PRDX4Q13162 271 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CNN3Q15417 329 aaKnown RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 BHLHA15Q7RTS1 189 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 LINC01551Q86U37 167 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CXorf67Q86X51 503 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF573Q86YE8 665 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 VKORC1L1Q8N0U8 176 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 CMTM2Q8TAZ6 248 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 MRGPRDQ8TDS7 321 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 MBD3L1Q8WWY6 194 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ZCCHC14Q8WYQ9 949 aaKnown RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM54Q969K7 222 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ST6GALNAC6Q969X2 333 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 BTF3L4Q96K17 158 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SPIN2AQ99865 258 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SPIN2BQ9BPZ2 258 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 MTIF3Q9H2K0 278 aaKnown RBP4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ZDHHC11Q9H8X9 412 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 GPR35Q9HC97 309 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM242Q9NWH2 141 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ADGRG4Q8IZF6 3080 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 SVILO95425 2214 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 ARFGEF3Q5TH69 2177 aa4.56□□□□□ -1.68
ATG4A-204ENST00000372246 MAP1BP46821 2468 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TRAV1-1A0A0B4J248 108 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TRAV24A0A0B4J272 114 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TLX3O43711 291 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms