RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 WNT10AQ9GZT5 417 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 ZDHHC11Q9H8X9 412 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 PATZ1Q9HBE1 687 aaKnown RBP9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 TBL2Q9Y4P3 447 aaKnown RBP9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 SDK2Q58EX2 2172 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 IGHV2-70DA0A0C4DH43 119 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 KLF3P57682 345 aaPredicted RBP9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 KIAA0895LQ68EN5 471 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 FGFRL1Q8N441 504 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 ZNF709Q8N972 641 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 SFXN3Q9BWM7 321 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 TMEM38BQ9NVV0 291 aa9.79□□□□□ -0.84
SMARCA1-201ENST00000371121 IGHV2OR16-5A0A0B4J2B6 119 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 C20orf202A1L168 122 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 GPM6AP51674 278 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 GFRA1P56159 465 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 LINC00205P59089 165 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 COLCA1Q6ZS62 124 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 RABEPKQ7Z6M1 372 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 CLDN23Q96B33 292 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM103A1Q9BTL3 118 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 AKIRIN1Q9H9L7 192 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 YTHDF2Q9Y5A9 579 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 TRBV6-6A0A0A6YYG2 114 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 A0A0J9YW62 118 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A10PA6NDY2 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A18PA6NE21 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A16PA6NEW6 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A20PA6NIJ5 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A8PA6NJQ4 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A7PA6NKC0 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A22PA8MWA6 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A12PA8MX19 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A5PA8MXJ8 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A23PA8MXZ1 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 KALRNO60229 2985 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 SERPINE2P07093 398 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A15PP0C7V4 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A13PP0C7W8 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A14PP0C7W9 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 FAM90A24PP0C7X0 464 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 CRISP2P16562 243 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 COTL1Q14019 142 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 OR5A2Q8NGI9 324 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 KCNE4Q8WWG9 221 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 BADQ92934 168 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 ULBP2Q9BZM5 246 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 NRN1Q9NPD7 142 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 CBR3O75828 277 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 RPL30P62888 115 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 ALKBH7Q9BT30 221 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 OR2H1Q9GZK4 316 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 METTL7AQ9H8H3 244 aa9.78□□□□□ -0.84
SMARCA1-201ENST00000371121 IGHV1OR21-1A0A087WYE8 117 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 A0A1W2PPC4 97 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 EPOPA6NHQ4 379 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 DIRC3C9JPN6 131 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ZG16O60844 167 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 C3orf79P0CE67 100 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 TSPOP30536 169 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ARG2P78540 354 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ASPHD1Q5U4P2 390 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ATOH7Q8N100 152 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 APOBEC3DQ96AK3 386 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 RNF2Q99496 336 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 HES4Q9HCC6 221 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 DEPPQ9NTK1 212 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 V9GYV3 84 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 IGLV3-19P01714 112 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF718Q3SXZ3 478 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ERASQ7Z444 233 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 DEFB119Q8N690 84 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 OR4B1Q8NGF8 309 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 RLN3Q8WXF3 142 aa9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF552Q9H707 407 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-201ENST00000371121 TRAV34A0A0B4J273 112 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 PPBPP02775 128 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 RANP62826 216 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 LCN12Q6JVE5 192 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 GMPPAQ96IJ6 420 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 NPIPB11E5RHQ5 1161 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 SIRPB1O00241 398 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 CCL2P13500 99 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 KRTDAPP60985 99 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 ETFRF1Q6IPR1 90 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 TIPARPQ7Z3E1 657 aaKnown RBP9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 DMXL2Q8TDJ6 3036 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 SAA2-SAA4A0A096LPE2 208 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 A0A1W2PR77 199 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 ZNF716A6NP11 495 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 CD300LBA8K4G0 201 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 GDF9O60383 454 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 SS18L1O75177 396 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 HINT1P49773 126 aaPredicted RBP9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 CLDN15P56746 228 aa9.76□□□□□ -0.85
SMARCA1-201ENST00000371121 FOXE3Q13461 319 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms