RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 TMEM170AQ8WVE7 144 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 SEBOXQ9HB31 216 aaPredicted RBP7.44□□□□□ -1.22
LCA5-201ENST00000369846 TRBV9A0A0B4J1U6 114 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 hADV38S2A0JD32 116 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 LINC01387J3KSC0 135 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 ZNF766Q5HY98 468 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 MRPL43Q8N983 215 aaKnown RBP7.44□□□□□ -1.22
LCA5-201ENST00000369846 WBP2Q969T9 261 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 HEXA-AS1Q9H8Q6 139 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 NPVFQ9HCQ7 196 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 PARP14Q460N5 1801 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 NDUFA2O43678 99 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 GREM1O60565 184 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 CTSVO60911 334 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 PEX11BO96011 259 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 IGLV3-25P01717 112 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 FCGR3AP08637 254 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 CXCL1P09341 107 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 CD38P28907 300 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 MBNL2Q5VZF2 373 aaKnown RBP7.44□□□□□ -1.22
LCA5-201ENST00000369846 WFDC3Q8IUB2 231 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 ZPLD1Q8TCW7 415 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 PERPQ96FX8 193 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 KLHDC2Q9Y2U9 406 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 HDGFL3Q9Y3E1 203 aa7.44□□□□□ -1.22
LCA5-201ENST00000369846 TRAV14DV4A0A0A6YYC5 116 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 A0A1B0GX78 115 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 CCL2P13500 99 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 ALKBH6Q3KRA9 238 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 BHLHA9Q7RTU4 235 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 SPRED2Q7Z698 418 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 DNASE2BQ8WZ79 361 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 SDF2L1Q9HCN8 221 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 FOXD3Q9UJU5 478 aaPredicted RBP7.43□□□□□ -1.22
LCA5-201ENST00000369846 UNC80Q8N2C7 3258 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 NOTCH2Q04721 2471 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 PGPA6NDG6 321 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 PLPP3O14495 311 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 ARL14EPLP0DKL9 152 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 FCGR2BP31994 310 aaPredicted RBP7.43□□□□□ -1.22
LCA5-201ENST00000369846 KIR3DL2P43630 455 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 CYB561P49447 251 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 RPL31P62899 125 aaKnown RBP7.43□□□□□ -1.22
LCA5-201ENST00000369846 OCIAD2Q56VL3 154 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 DIRC2Q96SL1 478 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 EGLN1Q9GZT9 426 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 SLC45A1Q9Y2W3 748 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 DICER1Q9UPY3 1922 aaKnown RBP7.43□□□□□ -1.22
LCA5-201ENST00000369846 ROS1P08922 2347 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 HTTP42858 3142 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 KBTBD11-OT1A0A1B0GTJ5 212 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 KHDC1LQ5JSQ8 128 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 SNHG12Q9BXW3 62 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 TMEM222Q9H0R3 208 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 BDP1A6H8Y1 2624 aa7.43□□□□□ -1.22
LCA5-201ENST00000369846 TRAV30A0A087WSZ9 112 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 ODAMA1E959 279 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 M0QZ24 198 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 ITGB1BP1O14713 200 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 VENTXO95231 258 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 TMEM50AO95807 157 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 F11P03951 625 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 APELAP0DMC3 54 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 ACP1P24666 158 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 GPR6P46095 362 aaPredicted RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 RPL34P49207 117 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 UNC119Q13432 240 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 SPTAN1Q13813 2472 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 Q8IYB0 196 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 OR1L1Q8NH94 360 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 SRSF12Q8WXF0 261 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 BOD1Q96IK1 185 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 RTN4RQ9BZR6 473 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 WNT16Q9UBV4 365 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 IGHV3-21A0A0B4J1V1 117 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 TMEM262E9PQX1 116 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 ESDP10768 282 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 GFRA1P56159 465 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 RPS11P62280 158 aaKnown RBP eCLIP7.42□□□□□ -1.22
LCA5-201ENST00000369846 YPEL5P62699 121 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 MPV17L2Q567V2 206 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 TMEM211Q6ICI0 200 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 VCX2Q9H322 139 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 CST9LQ9H4G1 147 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 RAXQ9Y2V3 346 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 CNOT1A5YKK6 2376 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 IGKV3-7A0A075B6H7 116 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 HTN1P15515 57 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 MRPS11P82912 194 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 GAGE13Q4V321 117 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 SELENOHQ8IZQ5 122 aaKnown RBP7.42□□□□□ -1.22
LCA5-201ENST00000369846 SPSB4Q96A44 273 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 MRGPRX3Q96LB0 322 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
LCA5-201ENST00000369846 NYNRINQ9P2P1 1898 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms