RNA–Protein interactions for RNA: ENST00000369774.8

SH3PXD2A-203, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SH3PXD2A, Length 11,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-203ENST00000369774 RBKSQ9H477 322 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 DTX4Q9Y2E6 619 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 SLC25A17O43808 307 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MEIG1Q5JSS6 88 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 LGALS3P17931 250 aaKnown RBP11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 C11orf91Q3C1V1 193 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MED12Q93074 2177 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 TET1Q8NFU7 2136 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 GPX1P07203 203 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 HIST1H4GQ99525 98 aa11.29□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PGPA6NDG6 321 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 NDUFB4O95168 129 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PCSK4Q6UW60 755 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 ZNF407Q9C0G0 2248 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PTPRFP10586 1907 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 A0A0U1RQV5 110 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 OR2H2O95918 312 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 THY1P04216 161 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 ZNF56Q15929 161 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 COL25A1Q9BXS0 654 aaPredicted RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 IDI2-AS1Q9NZ38 188 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MIOXQ9UGB7 285 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 CHD3Q12873 2000 aaKnown RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PDLIM4P50479 330 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 ANOS1P23352 680 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 RAB9AP51151 201 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 LEAP2Q969E1 77 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 FAM27BQ5VT28 67 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 COPS9Q8WXC6 57 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 PRR19A6NJB7 356 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 SIGIRRQ6IA17 410 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 TMEM52Q8NDY8 209 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 MRPL13Q9BYD1 178 aaKnown RBP11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 KLHDC2Q9Y2U9 406 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
SH3PXD2A-203ENST00000369774 FOXS1O43638 330 aa11.27□□□□□ -0.6
SH3PXD2A-203ENST00000369774 NEU1Q99519 415 aa11.27□□□□□ -0.6
SH3PXD2A-203ENST00000369774 SELENOTP62341 195 aa11.27□□□□□ -0.6
SH3PXD2A-203ENST00000369774 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 H0Y980 276 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 GFRA3O60609 400 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 IFNL4K9M1U5 179 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 NPFFO15130 113 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 S1PR2O95136 353 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 MDKP21741 143 aaPredicted RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 TSPOP30536 169 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 TSPAN2O60636 221 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 ZNF501Q96CX3 271 aaPredicted RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 CACNA1EQ15878 2313 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 H1FOOQ8IZA3 346 aaPredicted RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 GPR82Q96P67 336 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 GLI3P10071 1580 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
SH3PXD2A-203ENST00000369774 KCNK7Q9Y2U2 307 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 MMP16P51512 607 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 PSG9Q00887 426 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 OR13C6PQ8NH95 151 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 CALYQ9NYX4 217 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 SCN5AQ14524 2016 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 ACACAQ13085 2346 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 RBFOX2O43251 390 aaKnown RBP eCLIP11.26□□□□□ -0.612e-7■■■■■ 47.6
SH3PXD2A-203ENST00000369774 PKIAP61925 76 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 SERF2P84101 59 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 PQLC2Q6ZP29 291 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 RUNX1Q01196 453 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 MBNL2Q5VZF2 373 aaKnown RBP11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 DDA1Q9BW61 102 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 LRRK1Q38SD2 2015 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 EEF1AKMT3Q96AZ1 226 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 IGHV4-34P06331 123 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 ZP4Q12836 540 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
SH3PXD2A-203ENST00000369774 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■□□ 16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms