RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CEACAM21Q3KPI0 293 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 Q3ZCU0 254 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 SLC25A24Q6NUK1 477 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 SSX9Q7RTT3 188 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 GGNQ86UU5 652 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 THNSL2Q86YJ6 484 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 CALHM1Q8IU99 346 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 OR5A2Q8NGI9 324 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 S100PBPQ96BU1 408 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 ZNF837Q96EG3 531 aaPredicted RBP9.72□□□□□ -0.85
USF1-201ENST00000368019 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
USF1-201ENST00000368019 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
USF1-201ENST00000368019 DOCK7Q96N67 2140 aa9.71□□□□□ -0.85
USF1-201ENST00000368019 IGKV3D-15A0A087WSY6 115 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 IGHV3-15A0A0B4J1V0 119 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 IGKV1D-13A0A0B4J2D9 117 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 A0A1B0GV50 99 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 OR5B21A6NL26 309 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 TRAPPC2LH3BP13 241 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 SLC31A2O15432 143 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 ST8SIA5O15466 376 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 WDR1O75083 606 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 KBTBD11O94819 623 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 MBP02144 154 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 TYMSP04818 313 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 SCTP09683 121 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 IGKV1-13P0DP09 117 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 FAM3BP58499 235 aaPredicted RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 RAB11AP62491 216 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 CEACAM16Q2WEN9 425 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 WDR25Q64LD2 544 aaPredicted RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 ZDHHC23Q8IYP9 409 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 MRPL30Q8TCC3 161 aaKnown RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 APOBEC3DQ96AK3 386 aaPredicted RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 HIST1H2BLQ99880 126 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 FOXC2Q99958 501 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 PKIBQ9C010 78 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 WDR61Q9GZS3 305 aaKnown RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 MAGT1Q9H0U3 335 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 CHODLQ9H9P2 273 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.86
USF1-201ENST00000368019 GNG13Q9P2W3 67 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 OR14J1Q9UGF5 321 aa9.71□□□□□ -0.86
USF1-201ENST00000368019 MED12Q93074 2177 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 IGKV1-6A0A0C4DH72 117 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 MAP1LC3B2A6NCE7 125 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 RNF212BA8MTL3 300 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 ZNF205O95201 554 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 VENTXO95231 258 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 LY86O95711 162 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 SERPINE2P07093 398 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 B4GALT1P15291 398 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 BCL3P20749 454 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 CARD18P57730 90 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 GAMTQ14353 236 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 HNF4GQ14541 408 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 TMEM249Q2WGJ8 235 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 ACOT6Q3I5F7 207 aaPredicted RBP9.7□□□□□ -0.86
USF1-201ENST00000368019 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 SEM1Q6ZVN7 128 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
USF1-201ENST00000368019 TMEM217Q8N7C4 229 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 TCTEX1D1Q8N7M0 179 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 OR1P1Q8NH06 330 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 TMEM170AQ8WVE7 144 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 NINJ1Q92982 152 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 SARAFQ96BY9 339 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 MAP1LC3BQ9GZQ8 125 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 ZNF665Q9H7R5 613 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 SPRR3Q9UBC9 169 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 MPC1Q9Y5U8 109 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 URGCP-MRPS24S4R325 110 aa9.7□□□□□ -0.86
USF1-201ENST00000368019 A0A087X0M5 115 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 TRGV5A0A0B4J1U4 118 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 A0A1B0GX30 115 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 LRRC3CA6NJW4 275 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 CD300LBA8K4G0 201 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 P04436 131 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 RFPL3SP0C7P2 107 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 METTL15P1P0C7V9 234 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 CD99P14209 185 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 FABP4P15090 132 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
USF1-201ENST00000368019 IL2RGP31785 369 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 CCKARP32238 428 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 SRP14P37108 136 aaKnown RBP9.69□□□□□ -0.86
USF1-201ENST00000368019 ZNF726P1Q15940 193 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 BRICD5Q6PL45 260 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms