RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 JPT1Q9UK76 154 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 KLK13Q9UKR3 277 aa7.73□□□□□ -1.17
SYNE1-209ENST00000367257 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 ESDP10768 282 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
SYNE1-209ENST00000367257 C1orf194Q5T5A4 169 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 GUSBP11Q6P575 273 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 RND1Q92730 232 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 MRGPRFQ96AM1 343 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BLQ99880 126 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 MAP1LC3AQ9H492 121 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 PXMP4Q9Y6I8 212 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 DOCK5Q9H7D0 1870 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 PLXNA1Q9UIW2 1896 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 M0R3E3 92 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 PPP1CCP36873 323 aaKnown RBP7.72□□□□□ -1.17
SYNE1-209ENST00000367257 Q6AWC8 147 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 CBLN3Q6UW01 205 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 ST6GALNAC3Q8NDV1 305 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 CT55Q8WUE5 264 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 SPSB4Q96A44 273 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 A0A1B0GWB2 263 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 A0A1W2PPV9 198 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 MAS1LP35410 378 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 RPL27AP46776 148 aaKnown RBP7.72□□□□□ -1.17
SYNE1-209ENST00000367257 ZNF658BQ4V348 819 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-209ENST00000367257 IBA57Q5T440 356 aaKnown RBP7.72□□□□□ -1.17
SYNE1-209ENST00000367257 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 C10orf126Q8N4M7 172 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 LOXL4Q96JB6 756 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 PRDM14Q9GZV8 571 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 LINC01549A6NIU2 74 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 HLA-DRB1P01911 266 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 CDKN1BP46527 198 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 OCIAD2Q56VL3 154 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 RFESDQ8TAC1 157 aa7.72□□□□□ -1.17
SYNE1-209ENST00000367257 TMEM238C9JI98 176 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BKO60814 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BJP06899 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 NPSP0C0P6 89 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BOP23527 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BBP33778 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BDP58876 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BCP62807 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST2H2BEQ16778 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 NRN1LQ496H8 165 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-209ENST00000367257 SPANXN1Q5VSR9 72 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.71□□□□□ -1.17
SYNE1-209ENST00000367257 OR10AG1Q8NH19 301 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 TAF15Q92804 592 aaKnown RBP eCLIP7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BHQ93079 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BNQ99877 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 HIST1H2BMQ99879 126 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.17
SYNE1-209ENST00000367257 SF3B6Q9Y3B4 125 aaKnown RBP7.71□□□□□ -1.17
SYNE1-209ENST00000367257 TRAV8-7A0A075B6U6 113 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 C19orf67A6NJJ6 358 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 DEFB108AA8MXU0 73 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CDX4O14627 284 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 TNRC18O15417 2968 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 DANCRP0C864 163 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 TSPOP30536 169 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 SLC25A47Q6Q0C1 308 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 OR10J6PQ8NGY7 276 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 APOBEC4Q8WW27 367 aaKnown RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 REG4Q9BYZ8 158 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 GTSF1LQ9H1H1 148 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CEP290O15078 2479 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 DOPEY2Q9Y3R5 2298 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 PPIAL4EA0A075B759 164 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 PPIAL4DF5H284 164 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 TNFSF13O75888 250 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 PPIAL4FP0DN26 164 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 PSG2P11465 335 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 RND3P61587 244 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 COL10A1Q03692 680 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 OR4D11Q8NGI4 311 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF721Q8TF20 911 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 PPIAL4AQ9Y536 164 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 ARID2Q68CP9 1835 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM249Q2WGJ8 235 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CCL17Q92583 94 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF714Q96N38 554 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 RSPO3Q9BXY4 272 aaPredicted RBP7.71□□□□□ -1.18
SYNE1-209ENST00000367257 CACNA1GO43497 2377 aa7.71□□□□□ -1.18
SYNE1-209ENST00000367257 AHRRA9YTQ3 701 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 GDF9O60383 454 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 KBTBD11O94819 623 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 HKR1P10072 659 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 NMUP48645 174 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 HIKESHIQ53FT3 197 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms