RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TEPPQ6URK8 271 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 DEFB121Q5J5C9 76 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 IL22RA2Q969J5 263 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF207O43670 478 aaKnown RBP9.87□□□□□ -0.83
SYNE1-204ENST00000367248 PRR30Q53SZ7 412 aaPredicted RBP9.87□□□□□ -0.83
SYNE1-204ENST00000367248 FAM216BQ8N7L0 139 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 OR1L6Q8NGR2 347 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 SLC35B3Q9H1N7 401 aa9.87□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV3-66A0A0C4DH42 116 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 CLDN34H7C241 214 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 CD24P25063 80 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 SPCS3P61009 180 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 RPL8P62917 257 aaKnown RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 PSG5Q15238 335 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 C11orf91Q3C1V1 193 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 OR11H7Q8NGC8 314 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 OR4A5Q8NH83 315 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 C1QTNF5Q9BXJ0 243 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 RPL30P62888 115 aaKnown RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM88Q6PEY1 159 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 CLEC7AQ9BXN2 247 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 SLC2A8Q9NY64 477 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 EMP1P54849 157 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 FOXF2Q12947 444 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 BMPERQ8N8U9 685 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 RGP1Q92546 391 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 ROS1P08922 2347 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV3OR16-8A0A075B7F1 116 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 PSG7Q13046 419 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 VKORC1L1Q8N0U8 176 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 CDRT15L2A8MXV6 281 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 SS18L1O75177 396 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 PGLYRP1O75594 196 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-204ENST00000367248 LYPD3O95274 346 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 WDFY1Q8IWB7 410 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 SPRR3Q9UBC9 169 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 LOC102723971A0A1B0GUV8 181 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF273Q14593 569 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 C10orf113Q5VZT2 155 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM186Q96B77 213 aa9.86□□□□□ -0.83
SYNE1-204ENST00000367248 E9PLN8 166 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 KLK2P20151 261 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 CD300CQ08708 224 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF645Q8N7E2 425 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 VKORC1Q9BQB6 163 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 THSD7BQ9C0I4 1608 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 MFNGO00587 321 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 CAMPP49913 170 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF738Q8NE65 137 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 SELENOKQ9Y6D0 94 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF561Q8N587 486 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 ARHGEF17Q96PE2 2063 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-204ENST00000367248 IGHV3-11P01762 117 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 FAM106AQ4KMX7 169 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM204Q9BSN7 226 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 RAB5AP20339 215 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
SYNE1-204ENST00000367248 NPDC1Q9NQX5 325 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-204ENST00000367248 DOCK6Q96HP0 2047 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 A0A1B0GTI1 187 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 H0YL77 283 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 SSTR5P35346 364 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 ATP5G2Q06055 141 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 CALHM1Q8IU99 346 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 NEU4Q8WWR8 484 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-204ENST00000367248 SEC11BP0C7V7 166 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 MST1P26927 711 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 PPOXP50336 477 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 LAMTOR1Q6IAA8 161 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 NRIP2Q9BQI9 281 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 ARL2-SNX15V9GYD0 113 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 P2RY4P51582 365 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 PEAR1Q5VY43 1037 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-204ENST00000367248 SP5Q6BEB4 398 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-204ENST00000367248 DDB2Q92466 427 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 METTL26Q96S19 204 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 SHISA3A0PJX4 238 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 EFNA2O43921 213 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 TRGV3P03979 118 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 ZNF362Q5T0B9 420 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-204ENST00000367248 FGFRL1Q8N441 504 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 C5orf17Q8NAS9 161 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 ELF5Q9UKW6 265 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-204ENST00000367248 TNFSF18Q9UNG2 199 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 J3QKU1 62 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 CD1BP29016 333 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 OR10J1P30954 320 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 RBFOX3A6NFN3 312 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 KBTBD11O94819 623 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 PRB1P04280 392 aa9.84□□□□□ -0.83
SYNE1-204ENST00000367248 MUC6Q6W4X9 2439 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 GALR1P47211 349 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
SYNE1-204ENST00000367248 FXYD3Q14802 87 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 C1QL2Q7Z5L3 287 aa9.83□□□□□ -0.84
SYNE1-204ENST00000367248 ZFC3H1O60293 1989 aaKnown RBP9.83□□□□□ -0.84
SYNE1-204ENST00000367248 CTXND1A0A1B0GTU2 59 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms