RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RBMY1BA6NDE4 496 aaKnown RBP11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 RBMY1EA6NEQ0 496 aaKnown RBP11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 RBMY1DP0C7P1 496 aaKnown RBP11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 RBMY1A1P0DJD3 496 aaKnown RBP11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 RBMY1CP0DJD4 496 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 BIVMQ86UB2 503 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 FOXC2Q99958 501 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.56
SRGAP3-201ENST00000360413 PSG2P11465 335 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 RAE1P78406 368 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 PLCE1Q9P212 2302 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF729A6NN14 1252 aaPredicted RBP11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 DNAJB12Q9NXW2 375 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 SHISA8B8ZZ34 492 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 ABHD14BQ96IU4 210 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 LRRC61Q9BV99 259 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 ASIPP42127 132 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 FHITP49789 147 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 OR10AC1Q8NH08 325 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 J3QR06 171 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 VSIG10L2P0DP72 767 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 NHLRC3Q5JS37 347 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF793Q6ZN11 406 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 C1orf210Q8IVY1 113 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 NPVFQ9HCQ7 196 aa11.52□□□□□ -0.57
SRGAP3-201ENST00000360413 TNCP24821 2201 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 C2orf83Q53S99 150 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 PRDM14Q9GZV8 571 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 GPR35Q9HC97 309 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 ZDHHC8Q9ULC8 765 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 DLX6P56179 175 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 KIAA1644Q3SXP7 199 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 FAM219BQ5XKK7 198 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 THSD4Q6ZMP0 1018 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 TRAV8-2A0A0B4J237 113 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 ABCA3Q99758 1704 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 GREB1Q4ZG55 1949 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 AGFG2O95081 481 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 NKX2-2O95096 273 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 MPZL1O95297 269 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 OR4D5Q8NGN0 318 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 IGKV3-7A0A075B6H7 116 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 TSPAN2O60636 221 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 MYOGP15173 224 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 P2RY6Q15077 328 aa11.51□□□□□ -0.57
SRGAP3-201ENST00000360413 DTX2Q86UW9 622 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 CDC42EP2O14613 210 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 SPNS2Q8IVW8 549 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 CITED1Q99966 193 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PSMG3Q9BT73 122 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PXMP4Q9Y6I8 212 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 A0A1W2PRD5 423 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 A0A1W2PRF3 423 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 A0A1W2PRM7 423 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF205O95201 554 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 FXYD3Q14802 87 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 MSRB3Q8IXL7 192 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PATE1Q8WXA2 126 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PDFQ9HBH1 243 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 ELOVL5Q9NYP7 299 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 CISD1Q9NZ45 108 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 APELAP0DMC3 54 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 TGIF1Q15583 401 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 FFAR1O14842 300 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 HPRT1P00492 218 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 NEUROG1Q92886 237 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 DMRTA2Q96SC8 542 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 PLPP3O14495 311 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 CTLA4P16410 223 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 MARS2Q96GW9 593 aaKnown RBP11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 NBASA2RRP1 2371 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 H0Y8X5 98 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 HOXA3O43365 443 aaPredicted RBP11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 LDLRAD2Q5SZI1 272 aa11.5□□□□□ -0.57
SRGAP3-201ENST00000360413 TMEM160Q9NX00 188 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 LINC00470Q9BZP3 86 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 TUBD1Q9UJT1 453 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 NPFFO15130 113 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 TNFRSF9Q07011 255 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 RIF1Q5UIP0 2472 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 XIRP1Q702N8 1843 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 GFERP55789 205 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 SUMO2P61956 95 aaKnown RBP11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 PKIBQ9C010 78 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
SRGAP3-201ENST00000360413 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms