RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 IGKV3-20P01619 116 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 ZNF385CQ66K41 422 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-202ENST00000359082 MRAP2Q96G30 205 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 PPIAL4CA0A0B4J2A2 164 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 PRR33A8MZF0 331 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 PPIAL4GP0DN37 164 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 RHOVQ96L33 236 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 TMEM262E9PQX1 116 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 FSTP19883 344 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 UCNP55089 124 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 WNT2BQ93097 391 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 AMELYQ99218 206 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 SH3BGRL3Q9H299 93 aa15.81■□□□□ 0.12
SHANK1-202ENST00000359082 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.8■□□□□ 0.12
SHANK1-202ENST00000359082 OR1P1Q8NH06 330 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 B4E171 279 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 IGHV3-23P01764 117 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 TSPAN7P41732 249 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 EMP1P54849 157 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 TMEM45BQ96B21 275 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 DCTN5Q9BTE1 182 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 MRPS18AQ9NVS2 196 aaKnown RBP15.8■□□□□ 0.12
SHANK1-202ENST00000359082 FGFRL1Q8N441 504 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 PARLQ9H300 379 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 ZG16O60844 167 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 UNC119Q13432 240 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 FAM106AQ4KMX7 169 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 MMD2Q8IY49 270 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 FGF11Q92914 225 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 TUBD1Q9UJT1 453 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 LEPROTL1O95214 131 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 PRSS2P07478 247 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 PCSK4Q6UW60 755 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 TAF15Q92804 592 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHANK1-202ENST00000359082 CCL19Q99731 98 aa15.8■□□□□ 0.12
SHANK1-202ENST00000359082 ABHD12Q8N2K0 398 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 OR51M1Q9H341 326 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 MPDU1O75352 247 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 BEX4Q9NWD9 120 aaPredicted RBP15.79■□□□□ 0.12
SHANK1-202ENST00000359082 TRIP11Q15643 1979 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 NPFFO15130 113 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 LRRC3BQ96PB8 259 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 FOCADQ5VW36 1801 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 ARF6P62330 175 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 PEAR1Q5VY43 1037 aaPredicted RBP15.79■□□□□ 0.12
SHANK1-202ENST00000359082 SMAD7O15105 426 aaKnown RBP15.79■□□□□ 0.12
SHANK1-202ENST00000359082 SLC25A47Q6Q0C1 308 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 OR10S1Q8NGN2 331 aa15.79■□□□□ 0.12
SHANK1-202ENST00000359082 IGKV1-8A0A0C4DH67 115 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 AHRRA9YTQ3 701 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 GDF9O60383 454 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 KLRB1Q12918 225 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 P2RY6Q15077 328 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 GALNT14Q96FL9 552 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 SRXN1Q9BYN0 137 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 WNT5BQ9H1J7 359 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 S1PR2O95136 353 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 CTSSP25774 331 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 DLL3Q9NYJ7 618 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 P2RY4P51582 365 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 MBNL2Q5VZF2 373 aaKnown RBP15.78■□□□□ 0.12
SHANK1-202ENST00000359082 LOC105371242A0A075B767 164 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 IGHV3-48P01763 117 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 HSPB1P04792 205 aaKnown RBP15.78■□□□□ 0.12
SHANK1-202ENST00000359082 RELQ04864 619 aaPredicted RBP15.78■□□□□ 0.12
SHANK1-202ENST00000359082 WFIKKN1Q96NZ8 548 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 CHRNA10Q9GZZ6 450 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 DNAJC4Q9NNZ3 241 aa15.78■□□□□ 0.12
SHANK1-202ENST00000359082 CIRBPQ14011 172 aaKnown RBP15.77■□□□□ 0.12
SHANK1-202ENST00000359082 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.77■□□□□ 0.12
SHANK1-202ENST00000359082 SPRED2Q7Z698 418 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 SMDT1Q9H4I9 107 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 MT-ND6P03923 174 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 CRYBB3P26998 211 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 SELENOTP62341 195 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 MEF2BQ02080 365 aaPredicted RBP15.77■□□□□ 0.12
SHANK1-202ENST00000359082 ATP1A1-AS1Q5TC04 95 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 TMEM136Q6ZRR5 245 aa15.77■□□□□ 0.12
SHANK1-202ENST00000359082 CNTRLQ7Z7A1 2325 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 IGHV3-66A0A0C4DH42 116 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 HOXD4P09016 255 aaPredicted RBP15.77■□□□□ 0.11
SHANK1-202ENST00000359082 RPS20P60866 119 aaKnown RBP15.77■□□□□ 0.11
SHANK1-202ENST00000359082 OR13C6PQ8NH95 151 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 KCNK17Q96T54 332 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 MOSPD3O75425 235 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 CD1AP06126 327 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 CENPVQ7Z7K6 275 aaPredicted RBP15.77■□□□□ 0.11
SHANK1-202ENST00000359082 ATOH7Q8N100 152 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 AQP3Q92482 292 aa15.77■□□□□ 0.11
SHANK1-202ENST00000359082 TRBV5-5A0A0J9YX44 114 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 H0YL77 283 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 LIMS1P48059 325 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 SRIP30626 198 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 TRAV30A0A087WSZ9 112 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 PRSS53Q2L4Q9 553 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 EEF1AKMT3Q96AZ1 226 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 QTRT1Q9BXR0 403 aaKnown RBP15.76■□□□□ 0.11
SHANK1-202ENST00000359082 GPR132Q9UNW8 380 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 C7orf66A4D0T2 115 aa15.76■□□□□ 0.11
SHANK1-202ENST00000359082 ALX4Q9H161 411 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms