RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 FLRT3Q9NZU0 649 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 RNF115Q9Y4L5 304 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 IGLV3-27P01718 113 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 GLULP15104 373 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 CD300CQ08708 224 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 MDS2Q8NDY4 140 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 JMJD8Q96S16 334 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 SCNM1Q9BWG6 230 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 TMEM74BQ9NUR3 256 aa8.47□□□□□ -1.05
CHD3-202ENST00000358181 ARRDC5A6NEK1 342 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 GP2P55259 537 aaKnown RBP8.46□□□□□ -1.05
CHD3-202ENST00000358181 PAX2Q02962 417 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 ST3GAL2Q16842 350 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 OTOSQ8NHW6 89 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 RNF122Q9H9V4 155 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 MMP26Q9NRE1 261 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 APOMO95445 188 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 MBPP02686 304 aaPredicted RBP8.46□□□□□ -1.05
CHD3-202ENST00000358181 LIFP15018 202 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 CDKN1AP38936 164 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 MMP16P51512 607 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 TMEM249Q2WGJ8 235 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 OR13A1Q8NGR1 328 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 RBFOX3A6NFN3 312 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 PDCD6O75340 191 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 SFT2D2O95562 160 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 PRB1P04280 392 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 OR10J1P30954 320 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 SCN1AP35498 2009 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 DPTQ07507 201 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 LY6DQ14210 128 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 ISOC2Q96AB3 205 aa8.46□□□□□ -1.05
CHD3-202ENST00000358181 SNAI2O43623 268 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 HLA-DRB3P79483 266 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 PNRC1Q12796 327 aaPredicted RBP8.46□□□□□ -1.06
CHD3-202ENST00000358181 ZNF385CQ66K41 422 aaPredicted RBP8.46□□□□□ -1.06
CHD3-202ENST00000358181 UCN2Q96RP3 112 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 CHST5Q9GZS9 411 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 A0A0U1RQV5 110 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 C9orf170A2RU37 121 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 CCL3P10147 92 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 ABHD12Q8N2K0 398 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
CHD3-202ENST00000358181 GP6Q9HCN6 339 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 SLC6A13Q9NSD5 602 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 KIAA1217Q5T5P2 1943 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.06
CHD3-202ENST00000358181 FAM53BQ14153 422 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 CDK5R1Q15078 307 aa8.46□□□□□ -1.06
CHD3-202ENST00000358181 CNRIP1Q96F85 164 aaPredicted RBP8.46□□□□□ -1.06
CHD3-202ENST00000358181 IGHV1OR21-1A0A087WYE8 117 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 C1QTNF9BB2RNN3 333 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 LINC00869P0C866 280 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 LHX2P50458 406 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 AANATQ16613 207 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 JPT2Q9H910 190 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 SLC25A15Q9Y619 301 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 IGHV5-10-1A0A0J9YXX1 117 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 MUC1P15941 1255 aaPredicted RBP8.45□□□□□ -1.06
CHD3-202ENST00000358181 ZNF826PQ6ZT77 177 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 NHSQ6T4R5 1651 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 CXCL10P02778 98 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 Q5PR19 223 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 VKORC1L1Q8N0U8 176 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 MPC1Q9Y5U8 109 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 MIA3Q5JRA6 1907 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 ATP5LO75964 103 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 ASPDHA6ND91 283 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 PET117Q6UWS5 81 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 SLC35B3Q9H1N7 401 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 DOCK1Q14185 1865 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 SYNGR3O43761 229 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 MEF2CQ06413 473 aaPredicted RBP8.45□□□□□ -1.06
CHD3-202ENST00000358181 VAX1Q5SQQ9 334 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 PRSS42Q7Z5A4 293 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 TEX101Q9BY14 249 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 CALYQ9NYX4 217 aa8.45□□□□□ -1.06
CHD3-202ENST00000358181 FOXH1O75593 365 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 GZMHP20718 246 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 ASIPP42127 132 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 ST6GALNAC3Q8NDV1 305 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 SIRT4Q9Y6E7 314 aaPredicted RBP8.44□□□□□ -1.06
CHD3-202ENST00000358181 C17orf51A8MQB3 221 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 GATA4P43694 442 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 SSBP3Q9BWW4 388 aaPredicted RBP8.44□□□□□ -1.06
CHD3-202ENST00000358181 IGLV3-25P01717 112 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 TRGC1P0CF51 173 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 OR2H1Q9GZK4 316 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 IGHV1-69-2A0A0G2JMI3 117 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 PLPP3O14495 311 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 MOSP00540 346 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 CD7P09564 240 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 ASAH2BP0C7U1 165 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 PRR35P0CG20 571 aa8.44□□□□□ -1.06
CHD3-202ENST00000358181 TP53I13Q8NBR0 393 aaPredicted RBP8.44□□□□□ -1.06
CHD3-202ENST00000358181 ASB10Q8WXI3 467 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms