RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 OR2Y1Q8NGV0 311 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 CORO2AQ92828 525 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 TMEM54Q969K7 222 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 MSI2Q96DH6 328 aaKnown RBP8.53□□□□□ -1.04
RNF40-202ENST00000357890 TMEM38BQ9NVV0 291 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 ABI3Q9P2A4 366 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 ZNF391Q9UJN7 358 aa8.53□□□□□ -1.04
RNF40-202ENST00000357890 ACTL6BO94805 426 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 CD99P14209 185 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 CYB561P49447 251 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 PAFAH1B2P68402 229 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 HIST3H3Q16695 136 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 MRPL14Q6P1L8 145 aaKnown RBP8.52□□□□□ -1.04
RNF40-202ENST00000357890 ZDHHC23Q8IYP9 409 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 MOB3AQ96BX8 217 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 GPR146Q96CH1 333 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 GAL3ST2Q9H3Q3 398 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 PRDM6Q9NQX0 595 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 R4GN57 208 aa8.52□□□□□ -1.04
RNF40-202ENST00000357890 RIF1Q5UIP0 2472 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 TNFSF13O75888 250 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 UMODP07911 640 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 SRD5A2P31213 254 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 RBM11P57052 281 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 IL15RAQ13261 267 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 TGIF2LYQ8IUE0 185 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 NANOS1Q8WY41 292 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 P2RX4Q99571 388 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 B4GALT7Q9UBV7 327 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 BCL3P20749 454 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 SRP14P37108 136 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 PRDX4Q13162 271 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 RNASEH2CQ8TDP1 164 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 SRXN1Q9BYN0 137 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 OR2H1Q9GZK4 316 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 CLN8Q9UBY8 286 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 TBL2Q9Y4P3 447 aaKnown RBP8.52□□□□□ -1.05
RNF40-202ENST00000357890 CELSR3Q9NYQ7 3312 aa8.52□□□□□ -1.05
RNF40-202ENST00000357890 TRAV38-1A0A0B4J264 116 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 CTXND1A0A1B0GTU2 59 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 DNPH1O43598 174 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 CER1O95813 267 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 SPATA46Q5T0L3 261 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 DCAF12Q5T6F0 453 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 ABHD17BQ5VST6 288 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 TMEM211Q6ICI0 200 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 OR8I2Q8N0Y5 310 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 TAF15Q92804 592 aaKnown RBP eCLIP8.51□□□□□ -1.05
RNF40-202ENST00000357890 C18orf12Q96KH6 178 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 LIME1Q9H400 295 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 BOKQ9UMX3 212 aaPredicted RBP8.51□□□□□ -1.05
RNF40-202ENST00000357890 FBLL1A6NHQ2 334 aaKnown RBP8.51□□□□□ -1.05
RNF40-202ENST00000357890 FAM166BA8MTA8 275 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 K7ERU9 68 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 CTXN2P0C2S0 81 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 RND2P52198 227 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 KLF3P57682 345 aaPredicted RBP8.51□□□□□ -1.05
RNF40-202ENST00000357890 BCL2L2Q92843 193 aaPredicted RBP8.51□□□□□ -1.05
RNF40-202ENST00000357890 TECRQ9NZ01 308 aaKnown RBP8.51□□□□□ -1.05
RNF40-202ENST00000357890 DEGS1O15121 323 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 ZIC3O60481 467 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 CAMPP49913 170 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 FBLN7Q53RD9 439 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 OR8G5Q8NG78 346 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 WDYHV1Q96HA8 205 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 ZNF488Q96MN9 340 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 HIPK2Q9H2X6 1198 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 C12orf49Q9H741 205 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 ANAPC10Q9UM13 185 aa8.51□□□□□ -1.05
RNF40-202ENST00000357890 IGKV1-27A0A075B6S5 117 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 A0A1B0GW64 132 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 GALR2O43603 387 aaPredicted RBP8.5□□□□□ -1.05
RNF40-202ENST00000357890 COX6A1P12074 109 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 WNT5BQ9H1J7 359 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 CDH20Q9HBT6 801 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 IGKV1-12A0A0C4DH73 117 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 TMEM210A6NLX4 147 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 M0R2Z0 102 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 IGKV1D-12P01611 117 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 PFN1P07737 140 aaKnown RBP8.5□□□□□ -1.05
RNF40-202ENST00000357890 RPL24P83731 157 aaKnown RBP8.5□□□□□ -1.05
RNF40-202ENST00000357890 SERF2P84101 59 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 LINC00696Q6ZRV3 163 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 AKAP6Q13023 2319 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 LOC102723996A0A087X1L8 192 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 ATP5G3P48201 142 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 FXYD3Q14802 87 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 PRR31Q5SQ13 230 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 RNF138Q8WVD3 245 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 SSMEM1Q8WWF3 244 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 CLDN23Q96B33 292 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 IMMP1LQ96LU5 166 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 STRADBQ9C0K7 418 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 ENY2Q9NPA8 101 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 KCNIP1Q9NZI2 227 aa8.5□□□□□ -1.05
RNF40-202ENST00000357890 TMEM50AO95807 157 aa8.49□□□□□ -1.05
RNF40-202ENST00000357890 NAPSAO96009 420 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms