RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ESDP10768 282 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 DUSP2Q05923 314 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 WDR54Q9H977 334 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 GPR27Q9NS67 375 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 CSRP1P21291 193 aaKnown RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 DCAF12Q5T6F0 453 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 TEPPQ6URK8 271 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 OSTCQ9NRP0 149 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 TMEM238C9JI98 176 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RAB29O14966 203 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RHBDL1O75783 438 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 AREGP15514 252 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RIPPLY3P57055 190 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 SUPT4H1P63272 117 aaKnown RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 CT83Q5H943 113 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 PLAC9Q5JTB6 97 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 MRPL43Q8N983 215 aaKnown RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 LINC01549A6NIU2 74 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 GALR2O43603 387 aaPredicted RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 PAGE4O60829 102 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 G6PCP35575 357 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 OR52E5Q8NH55 327 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 MEGF9Q9H1U4 602 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 GLRX2Q9NS18 164 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 LANCL2Q9NS86 450 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 M0QZ24 198 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 ID3Q02535 119 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 OTPQ5XKR4 325 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 PIGCQ92535 297 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 ELSPBP1Q96BH3 223 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 CORTO00230 105 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 CLEC3BP05452 202 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 HTR1DP28221 377 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 FAM78AQ5JUQ0 283 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 ZNF611Q8N823 705 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 SSBP4Q9BWG4 385 aaPredicted RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RNF208Q9H0X6 261 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 SLC7A10Q9NS82 523 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 ODAMA1E959 279 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 TMEM251Q8N6I4 163 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RBMXL3Q8N7X1 1067 aaKnown RBP5.66□□□□□ -1.5
TRIM38-201ENST00000357085 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 SMPXQ9UHP9 88 aa5.66□□□□□ -1.5
TRIM38-201ENST00000357085 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.65□□□□□ -1.5
TRIM38-201ENST00000357085 TMEM262E9PQX1 116 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 TSPOP30536 169 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 HBBP68871 147 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 CCL20P78556 96 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 HYAL1Q12794 435 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 RSPO2Q6UXX9 243 aaPredicted RBP5.65□□□□□ -1.5
TRIM38-201ENST00000357085 GDF9O60383 454 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 PRAMEF5Q5TYX0 476 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 PRAMEF6Q5VXH4 476 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 CDX2Q99626 313 aaPredicted RBP5.65□□□□□ -1.5
TRIM38-201ENST00000357085 PRR32B1ATL7 298 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 CBLN1P23435 193 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 DHRS13Q6UX07 377 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 SPRED2Q7Z698 418 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 SPEM1Q8N4L4 309 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 CST9LQ9H4G1 147 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 PXMP4Q9Y6I8 212 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 SAA2-SAA4A0A096LPE2 208 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.65□□□□□ -1.5
TRIM38-201ENST00000357085 LRRC30A6NM36 301 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 CLDN18P56856 261 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 SOX8P57073 446 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 MGAT2Q10469 447 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 FOXF1Q12946 379 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 IL15RAQ13261 267 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 TNFRSF19Q9NS68 423 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 ASXL3Q9C0F0 2248 aa5.65□□□□□ -1.5
TRIM38-201ENST00000357085 TANC2Q9HCD6 1990 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 A0A087WV48 116 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 RTP5Q14D33 572 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 LILRA6Q6PI73 481 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 OR2M7Q8NG81 312 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 OR4C3Q8NH37 302 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 RNASE8Q8TDE3 154 aaKnown RBP5.65□□□□□ -1.51
TRIM38-201ENST00000357085 NRN1Q9NPD7 142 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 TPTE2P1Q5T6R2 138 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 DUSP13Q9UII6 198 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 PPP1R3CQ9UQK1 317 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 LINC00271P0C7V0 271 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 FGF12P61328 243 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 ERHP84090 104 aaKnown RBP5.65□□□□□ -1.51
TRIM38-201ENST00000357085 AMELYQ99218 206 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 METTL12A8MUP2 240 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 BCL3P20749 454 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 RPL23P62829 140 aaKnown RBP5.65□□□□□ -1.51
TRIM38-201ENST00000357085 OR1C1Q15619 314 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 FNDC7Q5VTL7 733 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 LHFPL6Q9Y693 200 aa5.65□□□□□ -1.51
TRIM38-201ENST00000357085 OR11L1Q8NGX0 322 aa5.64□□□□□ -1.51
TRIM38-201ENST00000357085 MENTQ9BUN1 341 aa5.64□□□□□ -1.51
TRIM38-201ENST00000357085 IZUMO1RA6ND01 250 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms