RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 LINC00869P0C866 280 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 VDAC2P45880 294 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 NMUP48645 174 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 C2orf83Q53S99 150 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 PNKDQ8N490 385 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 RCC2Q9P258 522 aaKnown RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ST6GALNAC2Q9UJ37 374 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 LOC389332A0A1B0GUA5 103 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 CDC42EP2O14613 210 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ASAH2BP0C7U1 165 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SLC25A53Q5H9E4 307 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SAMD13Q5VXD3 122 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM183AQ8IXX5 376 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 PKIBQ9C010 78 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 MAP1LC3AQ9H492 121 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 A1L4Q6 167 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 CGB1A6NKQ9 187 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 HCP5Q6MZN7 132 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 TMEM91Q6ZNR0 172 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 AQP10Q96PS8 301 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 QTRT1Q9BXR0 403 aaKnown RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 PSME4Q14997 1843 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 J3QW42 95 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 LMX1BO60663 402 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 FCGR3AP08637 254 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 CXCL3P19876 107 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 HOGA1Q86XE5 327 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SAP25Q8TEE9 199 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 MRPL24Q96A35 216 aaKnown RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ALG14Q96F25 216 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 FRRS1LQ9P0K9 344 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 PXMP4Q9Y6I8 212 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 UPK3AO75631 287 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SUMO2P61956 95 aaKnown RBP4.78□□□□□ -1.64
PTPRD-202ENST00000356435 DLK1P80370 383 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ZP4Q12836 540 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 COTL1Q14019 142 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 AWAT1Q58HT5 328 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ERASQ7Z444 233 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 ZNF383Q8NA42 475 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 PRSS27Q9BQR3 290 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 IL36RNQ9UBH0 155 aa4.78□□□□□ -1.64
PTPRD-202ENST00000356435 SOCS1O15524 211 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 CKS2P33552 79 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 RND2P52198 227 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 CACNG7P62955 275 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 EFNB1P98172 346 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ABHD12Q8N2K0 398 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF488Q96MN9 340 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 OR51M1Q9H341 326 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 IGHV3OR16-10A0A075B7F0 116 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 H3BRM9 83 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 AP4M1O00189 453 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 SLC25A17O43808 307 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ADAP1O75689 374 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 CA2P00918 260 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 TRGV3P03979 118 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 VSIG10L2P0DP72 767 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 MMP9P14780 707 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 C10orf128Q5T292 105 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 C1QL3Q5VWW1 255 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 RTN4RL2Q86UN3 420 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ITLN2Q8WWU7 325 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 A0A1W2PQF6 199 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 DNAL4O96015 105 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 AMY1AP04745 511 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 BTCP35070 178 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 CD69Q07108 199 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 FAM159AQ6UWV7 190 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 NEU4Q8WWR8 484 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 SSBP3Q9BWW4 388 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 NPVFQ9HCQ7 196 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 HSF4Q9ULV5 492 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 SIP14410 1827 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 OGG1O15527 345 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 FOLR2P14207 255 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 APOBEC3AP31941 199 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 PSG4Q00888 419 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 FXYD3Q14802 87 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 OR4A47Q6IF82 309 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 MT-ND6P03923 174 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 TCTAP57738 103 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 FGF12P61328 243 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 DUX3Q96PT4 197 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 NPFFR1Q9GZQ6 430 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 HRKO00198 91 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 BCL2P10415 239 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 G6PC2Q9NQR9 355 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 TRAV39A0A0B4J263 110 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 M0QZK8 103 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 GGCTO75223 188 aaKnown RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 COX6A1P12074 109 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 FCGR2BP31994 310 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-202ENST00000356435 MMP16P51512 607 aa4.77□□□□□ -1.65
PTPRD-202ENST00000356435 LINC01560Q8TB33 94 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms