RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 MT-CO3P00414 261 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 UMODP07911 640 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF441Q8N8Z8 693 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 NCOA6Q14686 2063 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-202ENST00000355815 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 CXCL1P09341 107 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 FGF5P12034 268 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 TBC1D28Q2M2D7 210 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 APOBEC3DQ96AK3 386 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-202ENST00000355815 SMIM8Q96KF7 97 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 ANGPTL4Q9BY76 406 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 K7ESF4 209 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 AGAP20933 346 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 SLC23A3Q6PIS1 610 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 PITX3O75364 302 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 AGFG2O95081 481 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 SGK494Q96LW2 274 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 DMRTA2Q96SC8 542 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 FAM117AQ9C073 453 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF355PQ9NSJ1 428 aa12.07□□□□□ -0.48
SREBF1-202ENST00000355815 GAGE10A6NGK3 116 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SYNGR1O43759 233 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF735P0CB33 412 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 C17orf82Q86X59 251 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 NHLRC2Q8NBF2 726 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 IL36RNQ9UBH0 155 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 OR5B21A6NL26 309 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SHISA7A6NL88 538 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 E9PLN8 166 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 FOXG1P55316 489 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 BPIFB3P59826 476 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 P2RY6Q15077 328 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 PTX4Q96A99 478 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 HIST1H2BLQ99880 126 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 MRPL18Q9H0U6 180 aaKnown RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 KLF13Q9Y2Y9 288 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 CIDEAO60543 219 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 FAM87AP0C7U9 286 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 RHOBP62745 196 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 FGFBP3Q8TAT2 258 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 IGSF23A1L1A6 192 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
SREBF1-202ENST00000355815 TMEM105Q8N8V8 129 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 TMEM178AQ8NBL3 297 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 WDR54Q9H977 334 aa12.06□□□□□ -0.48
SREBF1-202ENST00000355815 ALPK3Q96L96 1907 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 HELTA6NFD8 242 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 IFITM10A6NMD0 228 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 ZNF207O43670 478 aaKnown RBP12.05□□□□□ -0.48
SREBF1-202ENST00000355815 CEACAM1P13688 526 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 UCP3P55916 312 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 GNG3P63215 75 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 UBE2L3P68036 154 aaKnown RBP12.05□□□□□ -0.48
SREBF1-202ENST00000355815 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
SREBF1-202ENST00000355815 DCAF10Q5QP82 559 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 MOB1BQ7L9L4 216 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 SIGLEC12Q96PQ1 595 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 SLC45A2Q9UMX9 530 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 CRYM-AS1A6NIL9 109 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 CNIH1O95406 144 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 ORM2P19652 201 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 TRA2AQ13595 282 aaKnown RBP eCLIP12.05□□□□□ -0.48
SREBF1-202ENST00000355815 OR2M7Q8NG81 312 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 OR2T6Q8NHC8 308 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 SRIP30626 198 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
SREBF1-202ENST00000355815 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 CHRNA10Q9GZZ6 450 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 C9JQL5 133 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 IGHMP01871 453 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 MRPL14Q6P1L8 145 aaKnown RBP12.04□□□□□ -0.48
SREBF1-202ENST00000355815 LYG1Q8N1E2 194 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 TAAR3PQ9P1P4 343 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 SCGB1C2P0DMR2 95 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 ARR3P36575 388 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 SOX8P57073 446 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
SREBF1-202ENST00000355815 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
SREBF1-202ENST00000355815 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms