RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZNF788Q6ZQV5 615 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 C17orf107Q6ZR85 190 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF826PQ6ZT77 177 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF565Q8N9K5 539 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 OR52M1Q8NGK5 317 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 PLPPR1Q8TBJ4 325 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 RTN4IP1Q8WWV3 396 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-201ENST00000355766 CORO2AQ92828 525 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 TMEM230Q96A57 120 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 COQ2Q96H96 371 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 FYTTD1Q96QD9 318 aaKnown RBP5.69□□□□□ -1.5
VPS13A-201ENST00000355766 NMES1Q9C002 83 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 NARFLQ9H6Q4 476 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF665Q9H7R5 613 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 NAA60Q9H7X0 242 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 TMEM106BQ9NUM4 274 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 UFSP2Q9NUQ7 469 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 TANC2Q9HCD6 1990 aa5.69□□□□□ -1.5
VPS13A-201ENST00000355766 IGKV1-6A0A0C4DH72 117 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 GAGE12BA1L429 117 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 GAGE12HA6NDE8 117 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 DNAJC9-AS1A6NH13 148 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 LYNX1G3V0Z9 82 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 H0Y980 276 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 TMEM178BH3BS89 294 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 F2RL2O00254 374 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 SDCBPO00560 298 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 HSPB6O14558 160 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 WNT9BO14905 357 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 LYNX1P0DP58 116 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 RPA2P15927 270 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 AADACP22760 399 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 PRTN3P24158 256 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 GABRA2P47869 451 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 LUMP51884 338 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 PIGPP57054 158 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 SUPT4H1P63272 117 aaKnown RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF345Q14585 488 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ATXN7L3Q14CW9 347 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 BEAN1Q3B7T3 259 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 KRBOX4Q5JUW0 171 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 TMEM65Q6PI78 240 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ZCCHC24Q8N2G6 241 aaKnown RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 CD177Q8N6Q3 437 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 C8orf31Q8N9H6 132 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ASCC1Q8N9N2 400 aaKnown RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 OR2T35Q8NGX2 323 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 CAPSLQ8WWF8 208 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 MAFIPQ8WZ33 124 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 RAB39BQ96DA2 213 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 ABHD14BQ96IU4 210 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 GON7Q9BXV9 100 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 TAF9BQ9HBM6 251 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 LIN7CQ9NUP9 197 aaKnown RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 TAS2R3Q9NYW6 316 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 PIPOXQ9P0Z9 390 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 OR14J1Q9UGF5 321 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 CACFD1Q9UGQ2 172 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 KIF25Q9UIL4 384 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 UBE2J1Q9Y385 318 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-201ENST00000355766 TMED3Q9Y3Q3 217 aa5.68□□□□□ -1.5
VPS13A-201ENST00000355766 PPIAL4EA0A075B759 164 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 TRGV10A0A0A0MS01 117 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 IGHV1-69-2A0A0G2JMI3 117 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 TEX13DA0A0J9YY54 714 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-201ENST00000355766 hADV38S2A0JD32 116 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF729A6NN14 1252 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-201ENST00000355766 C12orf77C9JDV5 145 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 PPIAL4DF5H284 164 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 J3QLI3 93 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 GOSR2O14653 212 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 MPPED1O15442 326 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 YPEL1O60688 119 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 ATG12O94817 140 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 CDS2O95674 445 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 IFNA21P01568 189 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 RBP4P02753 201 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 SCTP09683 121 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 PPIAL4FP0DN26 164 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 SLC25A4P12235 298 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 SLC25A6P12236 298 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 AKR1C4P17516 323 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-201ENST00000355766 UCP1P25874 307 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 GNRHRP30968 328 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 RAB7AP51149 207 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 H2BFSP57053 126 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 LMO4P61968 165 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 CD300CQ08708 224 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 HFEQ30201 348 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 TMEM155Q4W5P6 130 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 IGSF11Q5DX21 431 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 GSG1LQ6UXU4 331 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 LGI3Q8N145 548 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 ZNF645Q8N7E2 425 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 SIGLECL1Q8N7X8 197 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 ADAD2Q8NCV1 583 aaKnown RBP5.67□□□□□ -1.5
VPS13A-201ENST00000355766 OR5T2Q8NGG2 359 aa5.67□□□□□ -1.5
VPS13A-201ENST00000355766 OR10V1Q8NGI7 309 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms