RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 GVINP1Q7Z2Y8 2422 aa11□□□□□ -0.65
COL6A3-203ENST00000353578 A0A0G2JLM5 398 aa11□□□□□ -0.65
COL6A3-203ENST00000353578 SPRY1O43609 319 aaPredicted RBP11□□□□□ -0.65
COL6A3-203ENST00000353578 OR4X1Q8NH49 305 aa11□□□□□ -0.65
COL6A3-203ENST00000353578 TMEM140Q9NV12 185 aa11□□□□□ -0.65
COL6A3-203ENST00000353578 RPL36A-HNRNPH2H7BZ11 118 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 FGF16O43320 207 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 MPZP25189 248 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 ATP6V0BQ99437 205 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 H3BUT2 72 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 LYZP61626 148 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 OR4D9Q8NGE8 314 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 TMEM208Q9BTX3 173 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 WNT5BQ9H1J7 359 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 IZUMO1RA6ND01 250 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 CD160O95971 181 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 C19orf54Q5BKX5 351 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 MRGPRFQ96AM1 343 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 C20orf144Q9BQM9 153 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 COX11Q9Y6N1 276 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 PLPP3O14495 311 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 PLNP26678 52 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 CLDND2Q8NHS1 167 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 CNRIP1Q96F85 164 aaPredicted RBP10.99□□□□□ -0.65
COL6A3-203ENST00000353578 GLRX2Q9NS18 164 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 A0A1B0GUT8 65 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 SAXO1Q8IYX7 474 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 ANKRD10Q9NXR5 420 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 KLF13Q9Y2Y9 288 aaPredicted RBP10.99□□□□□ -0.65
COL6A3-203ENST00000353578 PKDREJQ9NTG1 2253 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 COL24A1Q17RW2 1714 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 H7C1H1 209 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 B4GALT1P15291 398 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 AHDC1Q5TGY3 1603 aaPredicted RBP10.99□□□□□ -0.65
COL6A3-203ENST00000353578 PGLYRP3Q96LB9 341 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 ROS1P08922 2347 aa10.99□□□□□ -0.65
COL6A3-203ENST00000353578 CLDN14O95500 239 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 TRMT61AQ96FX7 289 aaKnown RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 PIMREGQ9BSJ6 248 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 EMC6Q9BV81 110 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 CBLN1P23435 193 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 RHBDD2Q6NTF9 364 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 CIARTQ8N365 385 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 RAB1BQ9H0U4 201 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 OTX1P32242 354 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 FOXL1Q12952 345 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 TMEM186Q96B77 213 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 PTGER1P34995 402 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 TUSC5Q8IXB3 177 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 NPIPB13A6NJU9 1138 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 NPIPB4C9JG80 1138 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 ETHE1O95571 254 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 SRP19P09132 144 aaKnown RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 INSL4Q14641 139 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 SSMEM1Q8WWF3 244 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 CNOT1A5YKK6 2376 aaKnown RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 CD5P06127 495 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 CDKN1BP46527 198 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 INSM1Q01101 510 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 COL10A1Q03692 680 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 FAM53AQ6NSI3 398 aaPredicted RBP10.98□□□□□ -0.65
COL6A3-203ENST00000353578 ORMDL3Q8N138 153 aa10.98□□□□□ -0.65
COL6A3-203ENST00000353578 TPTE2P1Q5T6R2 138 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
COL6A3-203ENST00000353578 CDKN3Q16667 212 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 FREM1Q5H8C1 2179 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 PIAS3Q9Y6X2 628 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
COL6A3-203ENST00000353578 SP9P0CG40 484 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 ZNF479Q96JC4 524 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 CACNA1BQ00975 2339 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 A8MWP6 167 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 OR8B12Q8NGG6 310 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 GATAD1Q8WUU5 269 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 LILRA5A6NI73 299 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 RCC1LQ96I51 464 aaKnown RBP10.97□□□□□ -0.65
COL6A3-203ENST00000353578 C5orf66Q9H5L9 145 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 LGALS7P47929 136 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 PAX2Q02962 417 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 F8W1H4 67 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 SLC25A40Q8TBP6 338 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 C14orf144Q96I85 54 aa10.97□□□□□ -0.65
COL6A3-203ENST00000353578 WNK1Q9H4A3 2382 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 ARPC1AQ92747 370 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 SPAG8Q99932 426 aaPredicted RBP10.96□□□□□ -0.65
COL6A3-203ENST00000353578 VKORC1L1Q8N0U8 176 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 PPIL1Q9Y3C6 166 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.65
COL6A3-203ENST00000353578 ZNF645Q8N7E2 425 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 RLN3Q8WXF3 142 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 A0A1W2PPC1 479 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 H7C2G1 150 aa10.96□□□□□ -0.65
COL6A3-203ENST00000353578 CTLA4P16410 223 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms