RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
PTPRO-202ENST00000348962 ZXDCQ2QGD7 858 aaPredicted RBP13.22□□□□□ -0.29
PTPRO-202ENST00000348962 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
PTPRO-202ENST00000348962 DPM3Q9P2X0 92 aa13.22□□□□□ -0.29
PTPRO-202ENST00000348962 ZIC3O60481 467 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 ATP6V0CP27449 155 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 EGR4Q05215 589 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 ZFP36L1Q07352 338 aaKnown RBP13.21□□□□□ -0.29
PTPRO-202ENST00000348962 HIST3H3Q16695 136 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 FAM24BQ8N5W8 94 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 CLRN3Q8NCR9 226 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 SSBP3Q9BWW4 388 aaPredicted RBP13.21□□□□□ -0.29
PTPRO-202ENST00000348962 PHOX2AO14813 284 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 RHBDL1O75783 438 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 S1PR2O95136 353 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 SYT8Q8NBV8 401 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 SOSTQ9BQB4 213 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 WFDC6Q9BQY6 131 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 IGHV3OR16-12A0A075B7B8 117 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 B4DEV8 164 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 PGLYRP1O75594 196 aaPredicted RBP13.21□□□□□ -0.29
PTPRO-202ENST00000348962 KBTBD11O94819 623 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 FXYD3Q14802 87 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 PRNTQ86SH4 94 aa13.21□□□□□ -0.29
PTPRO-202ENST00000348962 FOCADQ5VW36 1801 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 PITX3O75364 302 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 UMODP07911 640 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 CD59P13987 128 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 RELQ04864 619 aaPredicted RBP13.21□□□□□ -0.3
PTPRO-202ENST00000348962 UNC119Q13432 240 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 EEF1AKMT3Q96AZ1 226 aa13.21□□□□□ -0.3
PTPRO-202ENST00000348962 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.3
PTPRO-202ENST00000348962 TRBV5-7A0A0A0MS05 114 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 ISLRO14498 428 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 DEDDO75618 318 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 DPPA3Q6W0C5 159 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 LRRC75AQ8NAA5 344 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 NEURL2Q9BR09 285 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 TNFSF18Q9UNG2 199 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 UBE2V2Q15819 145 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 FAM216AQ8WUB2 273 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 Q96M66 194 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 NRXN2Q9P2S2 1712 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 VAMP3Q15836 100 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 TMEM252Q8N6L7 170 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 C7orf69Q9H7B7 122 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 G6PC2Q9NQR9 355 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 GPR132Q9UNW8 380 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
PTPRO-202ENST00000348962 PLA2G10O15496 165 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 TSPOP30536 169 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 PQLC2Q6ZP29 291 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 FADS6Q8N9I5 356 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 TAF1LQ8IZX4 1826 aa13.2□□□□□ -0.3
PTPRO-202ENST00000348962 MARCH11A6NNE9 402 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 CXCL3P19876 107 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 NPPCP23582 126 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
PTPRO-202ENST00000348962 FAM74A7A6NL05 159 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 NPIPB6E9PJ23 425 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
PTPRO-202ENST00000348962 FCGR2BP31994 310 aaPredicted RBP13.19□□□□□ -0.3
PTPRO-202ENST00000348962 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 LINC01590Q5TEZ4 76 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
PTPRO-202ENST00000348962 IGHV2OR16-5A0A0B4J2B6 119 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 E9PLN8 166 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 LMX1BO60663 402 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 LCN2P80188 198 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 LEAP2Q969E1 77 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 VKORC1Q9BQB6 163 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 C1QTNF12Q5T7M4 302 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 JMJD8Q96S16 334 aa13.19□□□□□ -0.3
PTPRO-202ENST00000348962 C17orf51A8MQB3 221 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 KLF4O43474 513 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 RAMP1O60894 148 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 THY1P04216 161 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 MAS1LP35410 378 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 TXNDC17Q9BRA2 123 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 TMEM191AQ9H0A3 160 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 CKAP5Q14008 2032 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
PTPRO-202ENST00000348962 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 RELBQ01201 579 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 LY6DQ14210 128 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
PTPRO-202ENST00000348962 CRIPAKQ8N1N5 446 aa13.18□□□□□ -0.3
PTPRO-202ENST00000348962 ELOVL1Q9BW60 279 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms