RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 PLEKHA2Q9HB19 425 aa17.58■□□□□ 0.4
TSPAN3-202ENST00000346495 CACNG5Q9UF02 275 aa17.58■□□□□ 0.4
TSPAN3-202ENST00000346495 RCL1Q9Y2P8 373 aaKnown RBP17.58■□□□□ 0.4
TSPAN3-202ENST00000346495 LRBAP50851 2863 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 EPG5Q9HCE0 2579 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 hCG_1809904A0A1W2PP81 198 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 A0A1W2PPE2 198 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 A0A1W2PR64 198 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 A0A1W2PRV1 198 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 J3QR06 171 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 FCGR3BO75015 233 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 HPRT1P00492 218 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 LIPFP07098 398 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 CXorf66Q5JRM2 361 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 SP5Q6BEB4 398 aaPredicted RBP17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 SLC51BQ86UW2 128 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 OR9G1Q8NH87 305 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 TMEM133Q9H2Q1 129 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 NARFLQ9H6Q4 476 aa17.57■□□□□ 0.4
TSPAN3-202ENST00000346495 KRASP01116 189 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 PVALBP20472 110 aaPredicted RBP17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 G6PCP35575 357 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 Q6ZRM9 215 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNF833PQ6ZTB9 187 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 ARPC5LQ9BPX5 153 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 COA4Q9NYJ1 87 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNF462Q96JM2 2506 aa17.56■□□□□ 0.4
TSPAN3-202ENST00000346495 MSGN1A6NI15 193 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 IFNA7P01567 189 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 IGHV4-39P01824 125 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 P0C879 139 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 HKR1P10072 659 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 RPL12P30050 165 aaKnown RBP17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 P2RY1P47900 373 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 ABHD12Q8N2K0 398 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNF525Q8N782 197 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNF680Q8NEM1 530 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 DMBX1Q8NFW5 382 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 OR4S2Q8NH73 311 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 USF3Q68DE3 2245 aa17.55■□□□□ 0.4
TSPAN3-202ENST00000346495 LOC105371242A0A075B767 164 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 C22orf46C9J442 243 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 MMP9P14780 707 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 PDLIM4P50479 330 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 POLR2GP62487 172 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 IZUMO4Q1ZYL8 232 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 FAM71F2Q6NXP2 309 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 OR10X1Q8NGY0 326 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 TNFRSF14Q92956 283 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 R3HDM4Q96D70 268 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 ZC4H2Q9NQZ6 224 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNRD1Q9P1U0 126 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 A1L4Q6 167 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 WRBO00258 174 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 H2BFWTQ7Z2G1 175 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 ZNF383Q8NA42 475 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 TMEM186Q96B77 213 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 C11orf1Q9H5F2 150 aa17.54■□□□□ 0.4
TSPAN3-202ENST00000346495 TOR1AO14656 332 aa17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 UBA52P62987 128 aaKnown RBP17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 VAMP2P63027 116 aa17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 GPR157Q5UAW9 335 aa17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 MAGT1Q9H0U3 335 aa17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 ONECUT1Q9UBC0 465 aa17.53■□□□□ 0.4
TSPAN3-202ENST00000346495 MARCH11A6NNE9 402 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 FAM90A26D6RGX4 464 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 SSSCA1O60232 199 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 GPR137BO60478 399 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 CFDP00746 253 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 IGHV2-5P01817 119 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 IL3RAP26951 378 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 EXOSC2Q13868 293 aaKnown RBP17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 BARX1Q9HBU1 254 aaPredicted RBP17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 MALRD1Q5VYJ5 2156 aa17.52■□□□□ 0.4
TSPAN3-202ENST00000346495 KIAA1324LA8MWY0 1029 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 NXPH3O95157 252 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 CT45A6P0DMU7 189 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 CT45A5P0DMU8 189 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 CT45A7P0DMV0 189 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 NQO2P16083 231 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 ARHGDIBP52566 201 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 ZNF137PP52743 207 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 PRRX1P54821 245 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 ERVK-16P61578 105 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 MIDNQ504T8 468 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 ZNF471Q9BX82 626 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 BPESC1Q9GZL8 116 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 UBQLN2Q9UHD9 624 aa17.51■□□□□ 0.39
TSPAN3-202ENST00000346495 IGHV2-26A0A0B4J1V2 119 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 FAM90A9PA6NNJ1 464 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 M0R1W7 72 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 TAAR5O14804 337 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 TAGLNQ01995 201 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 RTL8BQ17RB0 113 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 CLEC7AQ9BXN2 247 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 USP9XQ93008 2570 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 CHST1O43916 411 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 RRASP10301 218 aa17.5■□□□□ 0.39
TSPAN3-202ENST00000346495 NDUFA5Q16718 116 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms