RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CHRNB4P30926 498 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 SRD5A2P31213 254 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 MRPL21Q7Z2W9 205 aaKnown RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 C1orf174Q8IYL3 243 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 SLC25A45Q8N413 288 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 C11orf42Q8N5U0 333 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 VN1R17PQ8TDU5 208 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 DTD1Q8TEA8 209 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 IL1F10Q8WWZ1 152 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 IMMP1LQ96LU5 166 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CCDC74BQ96LY2 380 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF552Q9H707 407 aaPredicted RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF703Q9H7S9 590 aaPredicted RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 PATZ1Q9HBE1 687 aaKnown RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 MBNL3Q9NUK0 354 aaKnown RBP8.12□□□□□ -1.11
HOXA1-201ENST00000343060 CLN8Q9UBY8 286 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 FBXL7Q9UJT9 491 aa8.12□□□□□ -1.11
HOXA1-201ENST00000343060 TRAV39A0A0B4J263 110 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 OR5B21A6NL26 309 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF16P17020 682 aaPredicted RBP8.11□□□□□ -1.11
HOXA1-201ENST00000343060 SSR4P51571 173 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 LGALS4P56470 323 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 CARD18P57730 90 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ORAOV1Q8WV07 137 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 APOBEC3DQ96AK3 386 aaPredicted RBP8.11□□□□□ -1.11
HOXA1-201ENST00000343060 SGCZQ96LD1 299 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF488Q96MN9 340 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 RNF114Q9Y508 228 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 LY96Q9Y6Y9 160 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ASCC3Q8N3C0 2202 aaKnown RBP8.11□□□□□ -1.11
HOXA1-201ENST00000343060 IGHV1-45A0A0A0MS14 117 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 PGPEP1LA6NFU8 196 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ZG16O60844 167 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 WDR1O75083 606 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 NDUFB8O95169 186 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 DEFA4P12838 97 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 MYPOPQ86VE0 399 aaPredicted RBP8.11□□□□□ -1.11
HOXA1-201ENST00000343060 LRP11Q86VZ4 500 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 WDR54Q9H977 334 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 ARHGAP21Q5T5U3 1957 aa8.11□□□□□ -1.11
HOXA1-201ENST00000343060 A0A1W2PR80 420 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 G3V3Y1 287 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 RAB29O14966 203 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 TCF21O43680 179 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 CXCL13O43927 109 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 TFPI2P48307 235 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 RBX1P62877 108 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF645Q8N7E2 425 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 C11orf52Q96A22 123 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 C5orf30Q96GV9 206 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 QTRT1Q9BXR0 403 aaKnown RBP8.1□□□□□ -1.11
HOXA1-201ENST00000343060 LINC00470Q9BZP3 86 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF586Q9NXT0 402 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 UQCR10Q9UDW1 63 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 MPC1Q9Y5U8 109 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 GTF3C1Q12789 2109 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 C15orf62A8K5M9 175 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 C9JCJ5 164 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 TOMM40O96008 361 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 REG1AP05451 166 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 GPX1P07203 203 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 STAG3L2P0CL84 134 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 STAG3L3P0CL85 134 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 COX6A1P12074 109 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 UBE2G2P60604 165 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 GNG3P63215 75 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF90Q03938 601 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 BATFQ16520 125 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 ZNF718Q3SXZ3 478 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 SLC23A3Q6PIS1 610 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 TCTEX1D1Q8N7M0 179 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 OR10D3Q8NH80 312 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 OCC1Q8TAD7 63 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 GAL3ST2Q9H3Q3 398 aa8.1□□□□□ -1.11
HOXA1-201ENST00000343060 RBM7Q9Y580 266 aaKnown RBP8.1□□□□□ -1.11
HOXA1-201ENST00000343060 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 F2Z2F3 143 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 J3QT63 122 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 ITGB1BP1O14713 200 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 RAMP3O60896 148 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 MPDU1O75352 247 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 CLDN14O95500 239 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 IGLC2P0DOY2 106 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 IGLC3P0DOY3 106 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 CD1BP29016 333 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 G6PCP35575 357 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 PSG7Q13046 419 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 TRA2AQ13595 282 aaKnown RBP eCLIP8.09□□□□□ -1.11
HOXA1-201ENST00000343060 AARDQ4LEZ3 155 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 ZDHHC16Q969W1 377 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 LRFN3Q9BTN0 628 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 SFXN3Q9BWM7 321 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 GNB1LQ9BYB4 327 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 FOXJ2Q9P0K8 574 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 VCANP13611 3396 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 TRAV38-1A0A0B4J264 116 aa8.09□□□□□ -1.11
HOXA1-201ENST00000343060 DIRC3C9JPN6 131 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms