RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 TRAV9-1A0A075B6T8 112 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 LYZL6O75951 148 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 COX7A1P24310 79 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 SEC11AP67812 179 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 MRPL52Q86TS9 123 aaKnown RBP15.25■□□□□ 0.03
SYDE2-202ENST00000341460 TMEM186Q96B77 213 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 PLSCR4Q9NRQ2 329 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 OR6X1Q8NH79 312 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 CCL17Q92583 94 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 TMEM160Q9NX00 188 aa15.25■□□□□ 0.03
SYDE2-202ENST00000341460 K7EQS6 105 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 ESDP10768 282 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 NANOS3P60323 173 aaKnown RBP15.24■□□□□ 0.03
SYDE2-202ENST00000341460 P2RY6Q15077 328 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 FAM60AQ9NP50 221 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 GLRX2Q9NS18 164 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 MPC1Q9Y5U8 109 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 RAMP1O60894 148 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 GZMMP51124 257 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 CBLN3Q6UW01 205 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 C16orf47Q6ZP98 133 aaPredicted RBP15.24■□□□□ 0.03
SYDE2-202ENST00000341460 ORAOV1Q8WV07 137 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 DOCK2Q92608 1830 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 SFTPA2Q8IWL1 248 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 SFTPA1Q8IWL2 248 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 RAC3P60763 192 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 C10orf111Q8N326 155 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 CXXC4Q9H2H0 198 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 PGPEP1LA6NFU8 196 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 CT55Q8WUE5 264 aa15.24■□□□□ 0.03
SYDE2-202ENST00000341460 ZNF764Q96H86 408 aaPredicted RBP15.24■□□□□ 0.03
SYDE2-202ENST00000341460 FAM157AC9JC47 383 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 NUBP1P53384 320 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 GGTLC2Q14390 218 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 C1orf194Q5T5A4 169 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 HIGD1AQ9Y241 93 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 AMMECR1Q9Y4X0 333 aaPredicted RBP15.23■□□□□ 0.03
SYDE2-202ENST00000341460 A0A1W2PQD3 144 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 OR4A8P0C604 315 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 ARL14EPLP0DKL9 152 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 FSTP19883 344 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 RND1Q92730 232 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 AICDAQ9GZX7 198 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
SYDE2-202ENST00000341460 SCN9AQ15858 1988 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 CRYBB3P26998 211 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 FAM19A2Q8N3H0 131 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 ASB10Q8WXI3 467 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 SDF2L1Q9HCN8 221 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 KNL1Q8NG31 2342 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 HYPMO75409 117 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 PRSS12P56730 875 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 C1QL3Q5VWW1 255 aa15.23■□□□□ 0.03
SYDE2-202ENST00000341460 NHP2Q9NX24 153 aaKnown RBP15.23■□□□□ 0.03
SYDE2-202ENST00000341460 ARAP2Q8WZ64 1704 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 IGHV4-34P06331 123 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 FOXA3P55318 350 aaPredicted RBP15.22■□□□□ 0.03
SYDE2-202ENST00000341460 PIGYQ3MUY2 71 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TRAV30A0A087WSZ9 112 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TRAV8-4A0A0B4J246 113 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TSPAN2O60636 221 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TBX6O95947 436 aaPredicted RBP15.22■□□□□ 0.03
SYDE2-202ENST00000341460 RTP5Q14D33 572 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TIMP4Q99727 224 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TTC3P53804 2025 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 SPAG17Q6Q759 2223 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 ZNF708P17019 499 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 FCGR2BP31994 310 aaPredicted RBP15.22■□□□□ 0.03
SYDE2-202ENST00000341460 PNKDQ8N490 385 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 SF3B5Q9BWJ5 86 aaKnown RBP15.22■□□□□ 0.03
SYDE2-202ENST00000341460 CA11O75493 328 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 NTN1O95631 604 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 CCL2P13500 99 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 OR52M1Q8NGK5 317 aa15.22■□□□□ 0.03
SYDE2-202ENST00000341460 TRAV39A0A0B4J263 110 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 RPS20P60866 119 aaKnown RBP15.21■□□□□ 0.03
SYDE2-202ENST00000341460 GAGE13Q4V321 117 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 SPINK14Q6IE38 97 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 HEPN1Q6WQI6 88 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 SLC25A40Q8TBP6 338 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 RAB1BQ9H0U4 201 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 SPANXA1Q9NS26 97 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 PGPA6NDG6 321 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 C3orf80F5H4A9 247 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 TGFAP01135 160 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 CEACAM3P40198 252 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 CA7P43166 264 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 MIC13Q5XKP0 118 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 C5orf66Q9H5L9 145 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 COLCA2A8K830 154 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 J3QR06 171 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 KIR3DL2P43630 455 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 ACSF3Q4G176 576 aaPredicted RBP15.21■□□□□ 0.03
SYDE2-202ENST00000341460 RASL10BQ96S79 203 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 FLRT3Q9NZU0 649 aa15.21■□□□□ 0.03
SYDE2-202ENST00000341460 SF3B6Q9Y3B4 125 aaKnown RBP15.21■□□□□ 0.03
SYDE2-202ENST00000341460 CDK5RAP2Q96SN8 1893 aa15.21■□□□□ 0.02
SYDE2-202ENST00000341460 A0A1B0GW15 77 aa15.21■□□□□ 0.02
SYDE2-202ENST00000341460 TMEM249Q2WGJ8 235 aa15.21■□□□□ 0.02
SYDE2-202ENST00000341460 C19orf54Q5BKX5 351 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms