RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 TMEM250H0YL14 139 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 NEURL1O76050 574 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 ARL16Q0P5N6 197 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 J3QR06 171 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 SYNGR3O43761 229 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 FXYD3Q14802 87 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 CYP2G1PQ6ZSU1 146 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 LHFPL1Q86WI0 220 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 UBALD2Q8IYN6 164 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
RRP1B-201ENST00000340648 TEX50A0A1B0GTY4 177 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 A0A1W2PR77 199 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 HIST1H1BP16401 226 aaKnown RBP12.67□□□□□ -0.38
RRP1B-201ENST00000340648 ZNF137PP52743 207 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 PCOLCEQ15113 449 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 GFI1BQ5VTD9 330 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 SAXO1Q8IYX7 474 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 OR4X1Q8NH49 305 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 MESP1Q9BRJ9 268 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 hADV38S2A0JD32 116 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 RNF2Q99496 336 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 NDFIP1Q9BT67 221 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 PRNDQ9UKY0 176 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 ATXN7O15265 892 aaPredicted RBP12.67□□□□□ -0.38
RRP1B-201ENST00000340648 MPDU1O75352 247 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 P01737 135 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 CBLN1P23435 193 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 SOX8P57073 446 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 LYZP61626 148 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 QTRT1Q9BXR0 403 aaKnown RBP12.67□□□□□ -0.38
RRP1B-201ENST00000340648 CHCHD2Q9Y6H1 151 aaPredicted RBP12.67□□□□□ -0.38
RRP1B-201ENST00000340648 TPRP12270 2363 aaKnown RBP12.67□□□□□ -0.38
RRP1B-201ENST00000340648 SOD3P08294 240 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 RBPJQ06330 500 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 LRRC75BQ2VPJ9 315 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
RRP1B-201ENST00000340648 CXCL1P09341 107 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 SFRP2Q96HF1 295 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 OR51B2Q9Y5P1 312 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 A0A1W2PQM1 296 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 CLEC3BP05452 202 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 PQLC2Q6ZP29 291 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 CHRNA10Q9GZZ6 450 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 ARHGEF17Q96PE2 2063 aaPredicted RBP12.66□□□□□ -0.38
RRP1B-201ENST00000340648 MED12Q93074 2177 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 IGKV1D-13A0A0B4J2D9 117 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 MT-CO3P00414 261 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 IGKV1-13P0DP09 117 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 PRDX2P32119 198 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 PLAURQ03405 335 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 C10orf113Q5VZT2 155 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 RND1Q92730 232 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 CASP8AP2Q9UKL3 1982 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 SCN8AQ9UQD0 1980 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 SDK2Q58EX2 2172 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 TRAV17A0A0B4J275 112 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 A0A1W2PN81 502 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 RAB29O14966 203 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 ZIC3O60481 467 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 CLDN14O95500 239 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 COX6A1P12074 109 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 IBA57Q5T440 356 aaKnown RBP12.66□□□□□ -0.38
RRP1B-201ENST00000340648 OR4F17Q8NGA8 305 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 PKIBQ9C010 78 aa12.66□□□□□ -0.38
RRP1B-201ENST00000340648 FOXD3Q9UJU5 478 aaPredicted RBP12.66□□□□□ -0.38
RRP1B-201ENST00000340648 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 CCL1P22362 96 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
RRP1B-201ENST00000340648 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 TXNDC17Q9BRA2 123 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 RFNGQ9Y644 331 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 PRRG2O14669 202 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 SMPD2O60906 423 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 MT-ND6P03923 174 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 OR2T6Q8NHC8 308 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 FLYWCH2Q96CP2 140 aaKnown RBP12.65□□□□□ -0.38
RRP1B-201ENST00000340648 AKIRIN1Q9H9L7 192 aaPredicted RBP12.65□□□□□ -0.38
RRP1B-201ENST00000340648 TMEM56-RWDD3S4R434 201 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 COL8A1P27658 744 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 GABRA6Q16445 453 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 CCL17Q92583 94 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 GMPPAQ96IJ6 420 aaPredicted RBP12.65□□□□□ -0.38
RRP1B-201ENST00000340648 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 P2RY6Q15077 328 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 ABLIM2Q6H8Q1 611 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 AAMDCQ9H7C9 122 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 WIPI2Q9Y4P8 454 aa12.65□□□□□ -0.38
RRP1B-201ENST00000340648 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
RRP1B-201ENST00000340648 TFF3Q07654 80 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms