RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 S1PR2O95136 353 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 IGFBP2P18065 325 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 NFYBP25208 207 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 CAV2P51636 162 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 ZNF816Q0VGE8 651 aaPredicted RBP13.37□□□□□ -0.27
HPS1-202ENST00000338546 ZNF266Q14584 549 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 ZNF273Q14593 569 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 LINC00311Q8N616 119 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 ZNF596Q8TC21 504 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 DDB2Q92466 427 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 S1PR3Q99500 378 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 MAGT1Q9H0U3 335 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 HSPB7Q9UBY9 170 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 A0A087X0M5 115 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 A0A1B0GX30 115 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 FAM24AA6NFZ4 105 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 SLC31A2O15432 143 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 FCN3O75636 299 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 KRASP01116 189 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 PAX9P55771 341 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 AARDQ4LEZ3 155 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 TMEM155Q4W5P6 130 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 MIDNQ504T8 468 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 PRAMEF5Q5TYX0 476 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 FAM71F2Q6NXP2 309 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 H2BFWTQ7Z2G1 175 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 ODF3L1Q8IXM7 274 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 EIF4E3Q8N5X7 224 aaKnown RBP13.37□□□□□ -0.27
HPS1-202ENST00000338546 OR4S2Q8NH73 311 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 ZNF251Q9BRH9 671 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
HPS1-202ENST00000338546 RALYQ9UKM9 306 aaKnown RBP13.37□□□□□ -0.27
HPS1-202ENST00000338546 SAA2-SAA4A0A096LPE2 208 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 A0A1W2PPH5 198 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 TMEM50AO95807 157 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 SAA2P0DJI9 122 aaPredicted RBP13.36□□□□□ -0.27
HPS1-202ENST00000338546 G6PCP35575 357 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 TAGLNQ01995 201 aaKnown RBP13.36□□□□□ -0.27
HPS1-202ENST00000338546 NHLH2Q02577 135 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 RPL39P5Q59GN2 51 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 STX12Q86Y82 276 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 H1FXQ92522 213 aaKnown RBP13.36□□□□□ -0.27
HPS1-202ENST00000338546 RAB1CQ92928 201 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 SAT2Q96F10 170 aaPredicted RBP13.36□□□□□ -0.27
HPS1-202ENST00000338546 TIMD4Q96H15 378 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 MIOXQ9UGB7 285 aa13.36□□□□□ -0.27
HPS1-202ENST00000338546 ACACBO00763 2458 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 ABCA4P78363 2273 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 IGSF23A1L1A6 192 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 TXNL1O43396 289 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 FCGR3BO75015 233 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 MMP23AO75900 390 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 RBP4P02753 201 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 SEC11BP0C7V7 166 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 NQO2P16083 231 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 DLX6P56179 175 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 UBE2KP61086 200 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 TNFRSF9Q07011 255 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 OR2B11Q5JQS5 317 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 HSD17B13Q7Z5P4 300 aaPredicted RBP13.35□□□□□ -0.27
HPS1-202ENST00000338546 ADGRG4Q8IZF6 3080 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 LYG1Q8N1E2 194 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
HPS1-202ENST00000338546 R3HDM4Q96D70 268 aa13.35□□□□□ -0.27
HPS1-202ENST00000338546 NUDT19A8MXV4 375 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
HPS1-202ENST00000338546 SOD3P08294 240 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 FAM157CP0CG43 387 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 SULT1A1P50225 295 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 ERVK-16P61578 105 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 FAM74A1Q5RGS3 127 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 DHRS7BQ6IAN0 325 aaPredicted RBP13.34□□□□□ -0.27
HPS1-202ENST00000338546 ZNF841Q6ZN19 808 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 STPG2Q8N412 459 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 TMED6Q8WW62 240 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 CIB3Q96Q77 187 aaPredicted RBP13.34□□□□□ -0.27
HPS1-202ENST00000338546 AIFM2Q9BRQ8 373 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 SMIM3Q9BZL3 60 aa13.34□□□□□ -0.27
HPS1-202ENST00000338546 BARX1Q9HBU1 254 aaPredicted RBP13.34□□□□□ -0.27
HPS1-202ENST00000338546 MFSD2BA6NFX1 497 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 DFFBO76075 338 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 SULT1A2P50226 295 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 IZUMO4Q1ZYL8 232 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 ZNF833PQ6ZTB9 187 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 OR52E5Q8NH55 327 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 TNFRSF14Q92956 283 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 LEAP2Q969E1 77 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 BSCL2Q96G97 398 aaPredicted RBP13.33□□□□□ -0.28
HPS1-202ENST00000338546 CXorf58Q96LI9 332 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 REG4Q9BYZ8 158 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 CHODLQ9H9P2 273 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 WFDC1Q9HC57 220 aa13.33□□□□□ -0.28
HPS1-202ENST00000338546 SPTBN1Q01082 2364 aaKnown RBP13.33□□□□□ -0.28
HPS1-202ENST00000338546 CCL3L1P16619 93 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 RAB5CP51148 216 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 AANATQ16613 207 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms