RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 TMEM42Q69YG0 159 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TCTEX1D1Q8N7M0 179 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 NEIL1Q96FI4 390 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 MEGF10Q96KG7 1140 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CISD1Q9NZ45 108 aaKnown RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PROB1E7EW31 1015 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF737O75373 536 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 PLA2G2CQ5R387 149 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 COLCA1Q6ZS62 124 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 OR13A1Q8NGR1 328 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 HES4Q9HCC6 221 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 FAM201AQ5SY85 155 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 RHOVQ96L33 236 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 AP1S3Q96PC3 154 aa5.34□□□□□ -1.56
PRKDC-202ENST00000338368 FGF8P55075 233 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 BPIFB3P59826 476 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SUPT4H1P63272 117 aaKnown RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF273Q14593 569 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 INSIG2Q9Y5U4 225 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 IQCF6A8MYZ5 107 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 GFRA3O60609 400 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 KIR2DL2P43627 348 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 AWAT1Q58HT5 328 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 RSRP1Q9BUV0 290 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 RND3P61587 244 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 H1FOOQ8IZA3 346 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SMDT1Q9H4I9 107 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 PAGE4O60829 102 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 WDFY1Q8IWB7 410 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 RNF138Q8WVD3 245 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SPSB4Q96A44 273 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 ABHD14AQ9BUJ0 271 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SAMD10Q9BYL1 202 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 A0A1W2PN81 502 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 F8VVB4 439 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 F8VWA3 439 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 CFPP27918 469 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 CHRNA7P36544 502 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SERF2P84101 59 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 OR4C12Q96R67 309 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 TNXAQ16473 311 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 OR8B3Q8NGG8 313 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF714Q96N38 554 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 OR8B2Q96RD0 313 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 CHRDL1Q9BU40 450 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 ZDHHC11Q9H8X9 412 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SLC45A2Q9UMX9 530 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF705GA8MUZ8 300 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 REG1BP48304 166 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 PNRC1Q12796 327 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 LURAP1Q96LR2 239 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 TUBD1Q9UJT1 453 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 TRAV24A0A0B4J272 114 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 IGHV1-18A0A0C4DH31 117 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 COX7A2P2O60397 106 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 PDZD11Q5EBL8 140 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 MRGPRGQ86SM5 289 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 DTX1Q86Y01 620 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 C1orf147Q96MC9 270 aaPredicted RBP5.33□□□□□ -1.56
PRKDC-202ENST00000338368 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 VAX2Q9UIW0 290 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM56-RWDD3S4R434 201 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 A0A1W2PRD5 423 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 A0A1W2PRF3 423 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 A0A1W2PRM7 423 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 NPY1RP25929 384 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 SPCS3P61009 180 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 OR10A7Q8NGE5 316 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 HARBI1Q96MB7 349 aa5.33□□□□□ -1.56
PRKDC-202ENST00000338368 BARX1Q9HBU1 254 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 IGSF23A1L1A6 192 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 NPBWR1P48145 328 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 RHOBP62745 196 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF90Q03938 601 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 FOXF2Q12947 444 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ACP7Q6ZNF0 438 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 LEAP2Q969E1 77 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 WNK1Q9H4A3 2382 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ROS1P08922 2347 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 IGHG3P01860 377 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 SSTP61278 116 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 C4orf17Q53FE4 359 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 OR10J4P0C629 311 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 DANCRP0C864 163 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 CD40P25942 277 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 RSPO1Q2MKA7 263 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ASCL4Q6XD76 172 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 TAF15Q92804 592 aaKnown RBP eCLIP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 RBKSQ9H477 322 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 PARD6AQ9NPB6 346 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 C1RLQ9NZP8 487 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 FAM78BQ5VT40 261 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 PRR7Q8TB68 274 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 GTF3AQ92664 365 aaKnown RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZDHHC8Q9ULC8 765 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 MARCH11A6NNE9 402 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 NCBP2LA6PVI3 153 aaKnown RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 K7N7A8 449 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms