RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CEBPDP49716 269 aaPredicted RBP11.8□□□□□ -0.52
RTN4-202ENST00000337526 PPOXP50336 477 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 MMDQ15546 238 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 ASPHD2Q6ICH7 369 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 ASCL5Q7RTU5 278 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 OR51M1Q9H341 326 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 HEATR5BQ9P2D3 2071 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 MT-ND6P03923 174 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 COX6A1P12074 109 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 BTCP35070 178 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 RSPO4Q2I0M5 234 aaPredicted RBP11.8□□□□□ -0.52
RTN4-202ENST00000337526 TMEM116Q8NCL8 245 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 SIPA1L1O43166 1804 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 ODAMA1E959 279 aa11.8□□□□□ -0.52
RTN4-202ENST00000337526 ZG16O60844 167 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 HYPMO75409 117 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 BMI1P35226 326 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 IL36RNQ9UBH0 155 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 A8MWL6 223 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 LINC00869P0C866 280 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 COX5BP10606 129 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 CDX1P47902 265 aaPredicted RBP11.79□□□□□ -0.52
RTN4-202ENST00000337526 ZNF385CQ66K41 422 aaPredicted RBP11.79□□□□□ -0.52
RTN4-202ENST00000337526 ZNF343Q6P1L6 599 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 TMSB15BA0A087X1C1 80 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 CEACAM18A8MTB9 384 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 CD99P14209 185 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 CD82P27701 267 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 RPL30P62888 115 aaKnown RBP11.79□□□□□ -0.52
RTN4-202ENST00000337526 IGKV3D-11A0A0A0MRZ8 115 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
RTN4-202ENST00000337526 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
RTN4-202ENST00000337526 FAM209BQ5JX69 171 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 OR8G5Q8NG78 346 aa11.79□□□□□ -0.52
RTN4-202ENST00000337526 RTP5Q14D33 572 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 LSM10Q969L4 123 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 ELOVL1Q9BW60 279 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 WNK2Q9Y3S1 2297 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 AGAP20933 346 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 SELENOTP62341 195 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 GDF15Q99988 308 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 GCGP01275 180 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 RPL13AP40429 203 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 CDCP2Q5VXM1 449 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 GALNT14Q96FL9 552 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
RTN4-202ENST00000337526 HSPB8Q9UJY1 196 aa11.78□□□□□ -0.52
RTN4-202ENST00000337526 CD40P25942 277 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 HSPE1P61604 102 aaKnown RBP11.77□□□□□ -0.52
RTN4-202ENST00000337526 KCNMB1Q16558 191 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 SMIM8Q96KF7 97 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 ZNF714Q96N38 554 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 OPN3Q9H1Y3 402 aaPredicted RBP11.77□□□□□ -0.52
RTN4-202ENST00000337526 FREM3P0C091 2139 aa11.77□□□□□ -0.52
RTN4-202ENST00000337526 ZNF716A6NP11 495 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 S1PR2O95136 353 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 TRGC1P0CF51 173 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 DRAM1Q8N682 238 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 GCSAMQ8N6F7 178 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
RTN4-202ENST00000337526 SNRNP40Q96DI7 357 aaKnown RBP11.77□□□□□ -0.53
RTN4-202ENST00000337526 RALGAPA1Q6GYQ0 2036 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 PRR33A8MZF0 331 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 ZIC3O60481 467 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 PLAUP00749 431 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 GLIPR1P48060 266 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
RTN4-202ENST00000337526 ZNF788Q6ZQV5 615 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 TMEM54Q969K7 222 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 VWCEQ96DN2 955 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 PARLQ9H300 379 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
RTN4-202ENST00000337526 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
RTN4-202ENST00000337526 NAT2P11245 290 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 TGIF1Q15583 401 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 OR8A1Q8NGG7 326 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 A0A1B0GTI1 187 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 AHRRA9YTQ3 701 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 NKX2-8O15522 239 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 HOXB1P14653 301 aaPredicted RBP11.76□□□□□ -0.53
RTN4-202ENST00000337526 TM2D1Q9BX74 207 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 STARD6P59095 220 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 ZNF658BQ4V348 819 aaPredicted RBP11.76□□□□□ -0.53
RTN4-202ENST00000337526 DOLPP1Q86YN1 238 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
RTN4-202ENST00000337526 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms