RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TRGV5A0A0B4J1U4 118 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 NDUFB8O95169 186 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 TFF1P04155 84 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 CD46P15529 392 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 BMP5P22003 454 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 ECI1P42126 302 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 TMEM211Q6ICI0 200 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 PATZ1Q9HBE1 687 aaKnown RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 AKAP13Q12802 2813 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 CCKARP32238 428 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 TRIP6Q15654 476 aaKnown RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 WDYHV1Q96HA8 205 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 FER1L6-AS2Q96M78 137 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 Q9N2K0 584 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 ROS1P08922 2347 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 ANKRD30BLA7E2S9 258 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 TMEM11P17152 192 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 PNRC1Q12796 327 aaPredicted RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 ZNF726P1Q15940 193 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 Q6ZWC4 215 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 OR51H1Q8NH63 302 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 ZCCHC14Q8WYQ9 949 aaKnown RBP11.73□□□□□ -0.53
SF1-202ENST00000334944 ACY3Q96HD9 319 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 RNF115Q9Y4L5 304 aa11.73□□□□□ -0.53
SF1-202ENST00000334944 SIRPB1O00241 398 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 ZNF709Q8N972 641 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 GATAD1Q8WUU5 269 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 OR5P3Q8WZ94 311 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 INTS1Q8N201 2190 aaKnown RBP11.72□□□□□ -0.53
SF1-202ENST00000334944 A0A0U1RQK1 487 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 PITX3O75364 302 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 ARR3P36575 388 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
SF1-202ENST00000334944 PDLIM4P50479 330 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 SOX8P57073 446 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 RNPS1Q15287 305 aaKnown RBP11.72□□□□□ -0.53
SF1-202ENST00000334944 CLEC2AQ6UVW9 174 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
SF1-202ENST00000334944 TRAV24A0A0B4J272 114 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 ADAM20O43506 726 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 AGFG2O95081 481 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 OR5G3P0C626 314 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 ZNF695Q8IW36 515 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 OR4D5Q8NGN0 318 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 SNIP1Q8TAD8 396 aaKnown RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 SLC35E1Q96K37 410 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 NAPSAO96009 420 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 EGR1P18146 543 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 RPL23P62829 140 aaKnown RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 NRN1LQ496H8 165 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 ACTL10Q5JWF8 245 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 FAM78BQ5VT40 261 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 FAM53AQ6NSI3 398 aaPredicted RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
SF1-202ENST00000334944 VAMP8Q9BV40 100 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 PLEKHF2Q9H8W4 249 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 OR1A1Q9P1Q5 309 aa11.71□□□□□ -0.53
SF1-202ENST00000334944 HBE1P02100 147 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 GRPP07492 148 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 WDR86Q86TI4 376 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 FDCSPQ8NFU4 85 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 TECTBQ96PL2 329 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 MANBALQ9NQG1 85 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 OR6C3Q9NZP0 311 aa11.71□□□□□ -0.54
SF1-202ENST00000334944 DMXL2Q8TDJ6 3036 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 ZNF320A2RRD8 509 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 CDIPTO14735 213 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 CHST1O43916 411 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 TNFSF13O75888 250 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 FAM58AQ8N1B3 248 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 BCL2L2Q92843 193 aaPredicted RBP11.7□□□□□ -0.54
SF1-202ENST00000334944 TRIB1Q96RU8 372 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
SF1-202ENST00000334944 IL24Q13007 206 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
SF1-202ENST00000334944 OR5A2Q8NGI9 324 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms