RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ORMDL3Q8N138 153 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 OR51G1Q8NGK1 321 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SDF2L1Q9HCN8 221 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 PATJQ8NI35 1801 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TRAV8-2A0A0B4J237 113 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 H0YL77 283 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TNFSF14O43557 240 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SLC25A20O43772 301 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 MGAT2Q10469 447 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SAMD5Q5TGI4 173 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 FAM27BQ5VT28 67 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 C17orf99Q6UX52 265 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TRAV8-7A0A075B6U6 113 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SPTY2D1-AS1A0A0U1RR47 76 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SP9P0CG40 484 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 GAGE2BQ13066 116 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 GAGE2EQ4V326 116 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 LDLRAD1Q5T700 205 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 MORN3Q6PF18 240 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 MDP1Q86V88 176 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 AMER3Q8N944 861 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 SLC25A10Q9UBX3 287 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 GAGE2DQ9UEU5 116 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1B0GUT8 65 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BKO60814 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HBDP02042 147 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BJP06899 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BOP23527 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BBP33778 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BDP58876 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BCP62807 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST2H2BEQ16778 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM249Q2WGJ8 235 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BHQ93079 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 ZDHHC16Q969W1 377 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BNQ99877 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 HIST1H2BMQ99879 126 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 NRSN2Q9GZP1 204 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 PAPPA2Q9BXP8 1791 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 NKX2-8O15522 239 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 IFITM3Q01628 133 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 TMEM187Q14656 261 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 DRAM1Q8N682 238 aa4.78□□□□□ -1.64
PTPRB-202ENST00000334414 ZNF775Q96BV0 537 aaPredicted RBP4.78□□□□□ -1.64
PTPRB-202ENST00000334414 A0A1W2PRS3 328 aa4.78□□□□□ -1.65
PTPRB-202ENST00000334414 LMO7DNF2Z398 122 aa4.78□□□□□ -1.65
PTPRB-202ENST00000334414 HOXA3O43365 443 aaPredicted RBP4.78□□□□□ -1.65
PTPRB-202ENST00000334414 CACNG7P62955 275 aa4.78□□□□□ -1.65
PTPRB-202ENST00000334414 ACTL10Q5JWF8 245 aa4.78□□□□□ -1.65
PTPRB-202ENST00000334414 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.65
PTPRB-202ENST00000334414 WBP1LQ9NX94 342 aa4.78□□□□□ -1.65
PTPRB-202ENST00000334414 TRAV1-1A0A0B4J248 108 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LGALS1P09382 135 aaKnown RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 NRN1LQ496H8 165 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 HDHD3Q9BSH5 251 aaPredicted RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 HES7Q9BYE0 225 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 CDIPTO14735 213 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 WFDC8Q8IUA0 241 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 OR1K1Q8NGR3 316 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 GNRHR2Q96P88 292 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LY96Q9Y6Y9 160 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 TRAV17A0A0B4J275 112 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 A0A1B0GTL3 188 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LINC00587B1AMM8 73 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 F8VVB4 439 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 F8VWA3 439 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 H3BUT2 72 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 CEACAM5P06731 702 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LILRA3Q8N6C8 439 aaPredicted RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SIT1Q9Y3P8 196 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 MKRN2OSH3BPM6 223 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SOCS1O15524 211 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 DLEU1O43261 78 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 TNFSF13O75888 250 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LDLRAD2Q5SZI1 272 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LINC00696Q6ZRV3 163 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 FAM90A1Q86YD7 464 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 OR4C13Q8NGP0 309 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 PHLDA1Q8WV24 401 aaPredicted RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 MRPS18BQ9Y676 258 aaKnown RBP4.77□□□□□ -1.65
PTPRB-202ENST00000334414 COL10A1Q03692 680 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 SPINK9Q5DT21 86 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 FAM57AQ8TBR7 257 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 GPBAR1Q8TDU6 330 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 PRSS27Q9BQR3 290 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 AGMATQ9BSE5 352 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 TRBV20OR9-2A0A075B6H5 130 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 FGF16O43320 207 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LHX8Q68G74 356 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 THSD4Q6ZMP0 1018 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 GDF15Q99988 308 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 LINC00470Q9BZP3 86 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 CCL26Q9Y258 94 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 FAM181BA6NEQ2 426 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 CENPWQ5EE01 88 aa4.77□□□□□ -1.65
PTPRB-202ENST00000334414 BADQ92934 168 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms