RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SCAND1P57086 179 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TAS2R31P59538 309 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 NKX6-1P78426 367 aaPredicted RBP13.3□□□□□ -0.28
PDGFB-201ENST00000331163 HAGHQ16775 308 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 IGFBPL1Q8WX77 278 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 C2orf50Q96LR7 162 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 M0R1X1 148 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 SFT2D2O95562 160 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 IGLV1-44P01699 117 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 RAB5CP51148 216 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 DMBX1Q8NFW5 382 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 ERGIC1Q969X5 290 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 NMES1Q9C002 83 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TNCP24821 2201 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 CD37P11049 281 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 MPV17LQ2QL34 196 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 PYY3Q5JQD4 70 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 SOHLH1Q5JUK2 328 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 PRAMEF5Q5TYX0 476 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 ABHD5Q8WTS1 349 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 SH3BGRL3Q9H299 93 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM106BQ9NUM4 274 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 METTL1Q9UBP6 276 aaKnown RBP13.29□□□□□ -0.28
PDGFB-201ENST00000331163 GPX4P36969 197 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-201ENST00000331163 ARF6P62330 175 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 LRRC10Q5BKY1 277 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 GFI1BQ5VTD9 330 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TRAV38-1A0A0B4J264 116 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TRDCB7Z8K6 153 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 SOD3P08294 240 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 GPR12P47775 334 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 C10orf91Q5T1B1 145 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 SAT2Q96F10 170 aaPredicted RBP13.29□□□□□ -0.28
PDGFB-201ENST00000331163 RARRES2Q99969 163 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 SLC2A9Q9NRM0 540 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 PLA2G2EQ9NZK7 142 aa13.29□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 NUDT19A8MXV4 375 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM127O75204 238 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 CD177Q8N6Q3 437 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 OR10X1Q8NGY0 326 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 C22orf15Q8WYQ4 148 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 PTX4Q96A99 478 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 SMIM8Q96KF7 97 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 PCGF1Q9BSM1 259 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
PDGFB-201ENST00000331163 FBP1P09467 338 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 HES1Q14469 280 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 ARRDC1Q8N5I2 433 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 UBAC2Q8NBM4 344 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 GPR61Q9BZJ8 451 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 PKIBQ9C010 78 aa13.28□□□□□ -0.28
PDGFB-201ENST00000331163 GAR1Q9NY12 217 aaKnown RBP13.28□□□□□ -0.28
PDGFB-201ENST00000331163 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 HKR1P10072 659 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 FABP4P15090 132 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 TAGLN2P37802 199 aaKnown RBP13.27□□□□□ -0.28
PDGFB-201ENST00000331163 VAMP2P63027 116 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 LYZL2Q7Z4W2 148 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 POM121Q96HA1 1249 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 ODAMA1E959 279 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 C12orf77C9JDV5 145 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 MELTFP08582 738 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 AGAP20933 346 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 SULT1A2P50226 295 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 CCDC71LQ8N9Z2 235 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 CLN8Q9UBY8 286 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 ZDHHC8Q9ULC8 765 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 ZNF835Q9Y2P0 537 aa13.27□□□□□ -0.28
PDGFB-201ENST00000331163 FCGR3BO75015 233 aa13.27□□□□□ -0.29
PDGFB-201ENST00000331163 CD5P06127 495 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 ATP5J2P56134 94 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 BTNL8Q6UX41 500 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 TBC1D26Q86UD7 250 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 ZNF665Q9H7R5 613 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 UNKLQ9H9P5 680 aaKnown RBP13.26□□□□□ -0.29
PDGFB-201ENST00000331163 DOK5Q9P104 306 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 OOEPA6NGQ2 149 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 GATCO43716 136 aaKnown RBP13.26□□□□□ -0.29
PDGFB-201ENST00000331163 UBE2KP61086 200 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 SUPT4H1P63272 117 aaKnown RBP13.26□□□□□ -0.29
PDGFB-201ENST00000331163 VKORC1L1Q8N0U8 176 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 LIME1Q9H400 295 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 RAB18Q9NP72 206 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 MYOZ1Q9NP98 299 aaPredicted RBP13.26□□□□□ -0.29
PDGFB-201ENST00000331163 GPR132Q9UNW8 380 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 CYB5BO43169 146 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 GAMTQ14353 236 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 SSX3Q99909 188 aa13.26□□□□□ -0.29
PDGFB-201ENST00000331163 IGKV1D-17A0A075B6S4 117 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 IAPPP10997 89 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 KITLGP21583 273 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 GNB2P62879 340 aa13.25□□□□□ -0.29
PDGFB-201ENST00000331163 HLA-DRB3P79483 266 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms