RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 RNF7Q9UBF6 113 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 BCL2P10415 239 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 K7ESF4 209 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 IGLV3-19P01714 112 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF735P0CB33 412 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 MPV17P39210 176 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 INO80CQ6PI98 192 aaPredicted RBP14.07□□□□□ -0.16
CLIP4-201ENST00000320081 TMEM56Q96MV1 263 aa14.07□□□□□ -0.16
CLIP4-201ENST00000320081 IGHMP01871 453 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 PGA5P0DJD9 388 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 C10orf128Q5T292 105 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF383Q8NA42 475 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 PCGF1Q9BSM1 259 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 NAT8Q9UHE5 227 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 F8VVB4 439 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 F8VWA3 439 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 CD1BP29016 333 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 RAB24Q969Q5 203 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 RBKSQ9H477 322 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 A8MXK9 166 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 IFI6P09912 130 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF137PP52743 207 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 FHL1Q13642 323 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 MRGPRGQ86SM5 289 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 OR10G8Q8NGN5 311 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 SH2D2AQ9NP31 389 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 PARD6AQ9NPB6 346 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 TIMM9Q9Y5J7 89 aa14.06□□□□□ -0.16
CLIP4-201ENST00000320081 IGKV1-12A0A0C4DH73 117 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF253O75346 499 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 IGKV1D-12P01611 117 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 GAPDHP04406 335 aaKnown RBP14.05□□□□□ -0.16
CLIP4-201ENST00000320081 REG1AP05451 166 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 RPL39P5Q59GN2 51 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF703Q9H7S9 590 aaPredicted RBP14.05□□□□□ -0.16
CLIP4-201ENST00000320081 CLDN16Q9Y5I7 305 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 LAMA3Q16787 3333 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 K7EQM0 130 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 DNASE2O00115 360 aaPredicted RBP14.05□□□□□ -0.16
CLIP4-201ENST00000320081 RTP5Q14D33 572 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 KIAA1644Q3SXP7 199 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 Q56UQ5 140 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 C16orf82Q7Z2V1 217 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 TGIF2LYQ8IUE0 185 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 EAF1Q96JC9 268 aaPredicted RBP14.05□□□□□ -0.16
CLIP4-201ENST00000320081 MEGF10Q96KG7 1140 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 NLRC5Q86WI3 1866 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 C20orf202A1L168 122 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 ADH4P08319 380 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 CSN1S1P47710 185 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 RNF151Q2KHN1 245 aa14.05□□□□□ -0.16
CLIP4-201ENST00000320081 SP9P0CG40 484 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 PRR7Q8TB68 274 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLIP4-201ENST00000320081 PAM16Q9Y3D7 125 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 YLPM1P49750 1951 aaKnown RBP14.04□□□□□ -0.16
CLIP4-201ENST00000320081 MARCH11A6NNE9 402 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 H0Y980 276 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 PITX3O75364 302 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 FAM27E3Q08E93 113 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 HILPDAQ9Y5L2 63 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 DYSFO75923 2080 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 DUXBA0A1W2PPF3 345 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 CLPSP04118 112 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 OR4X1Q8NH49 305 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 TUBD1Q9UJT1 453 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 ODAMA1E959 279 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 LINC00587B1AMM8 73 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 OR2J3O76001 311 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 CRISP2P16562 243 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 RAB7AP51149 207 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 DPPA3Q6W0C5 159 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 OR2T6Q8NHC8 308 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 TMEM54Q969K7 222 aa14.04□□□□□ -0.16
CLIP4-201ENST00000320081 MYOZ1Q9NP98 299 aaPredicted RBP14.04□□□□□ -0.16
CLIP4-201ENST00000320081 OTOGLQ3ZCN5 2332 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 CYC1P08574 325 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 MEF2BQ02080 365 aaPredicted RBP14.03□□□□□ -0.16
CLIP4-201ENST00000320081 LYRM2Q9NU23 88 aaPredicted RBP14.03□□□□□ -0.16
CLIP4-201ENST00000320081 A0A087X0M5 115 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 CTXND1A0A1B0GTU2 59 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 A0A1B0GX30 115 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 CD55P08174 381 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 FOSL1P15407 271 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 OR10J1P30954 320 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 GAL3ST2Q9H3Q3 398 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 SLC45A2Q9UMX9 530 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 SNURFLB1AK76 121 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 C9orf172C9J069 976 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 C16orf97H3BN30 126 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 PSG7Q13046 419 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 ZNF441Q8N8Z8 693 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 OR2D3Q8NGH3 330 aa14.03□□□□□ -0.16
CLIP4-201ENST00000320081 FXYD3Q14802 87 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 INSIG2Q9Y5U4 225 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 PXMP4Q9Y6I8 212 aa14.02□□□□□ -0.16
CLIP4-201ENST00000320081 C5orf42Q9H799 3197 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms