RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 EIF5A2Q9GZV4 153 aaKnown RBP6.28□□□□□ -1.4
IFT88-201ENST00000319980 PRORYQ9H606 182 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 JPT1Q9UK76 154 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 STRAPQ9Y3F4 350 aaKnown RBP6.28□□□□□ -1.4
IFT88-201ENST00000319980 YPEL1O60688 119 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 CLDN14O95500 239 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 SNCAP37840 140 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 TNFRSF9Q07011 255 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 ARL16Q0P5N6 197 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 CR1LQ2VPA4 569 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 ZNF66Q6ZN08 573 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 FAM216BQ8N7L0 139 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 FAM222BQ8WU58 562 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
IFT88-201ENST00000319980 C14orf79Q96F83 325 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 YPEL2Q96QA6 119 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 SEBOXQ9HB31 216 aaPredicted RBP6.28□□□□□ -1.4
IFT88-201ENST00000319980 COA4Q9NYJ1 87 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 CALYQ9NYX4 217 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 FBXO7Q9Y3I1 522 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 POLEQ07864 2286 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 A0A1W2PPE3 182 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 FAM74A7A6NL05 159 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 LRRC30A6NM36 301 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 MARCH11A6NNE9 402 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 C17orf100A8MU93 164 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TRIM77I1YAP6 450 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TMPRSS2O15393 492 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 DFFBO76075 338 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 IFNA5P01569 189 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
IFT88-201ENST00000319980 TNFRSF1AP19438 455 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 DUTP33316 252 aaKnown RBP6.27□□□□□ -1.41
IFT88-201ENST00000319980 PPT1P50897 306 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 BPIFB3P59826 476 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 ZNF273Q14593 569 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 FAM74A3Q4VXF1 159 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 STUMQ69YW2 141 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 H2BFWTQ7Z2G1 175 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 SDSLQ96GA7 329 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.27□□□□□ -1.41
IFT88-201ENST00000319980 UMAD1C9J7I0 102 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 M0R1X1 148 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 FCGR3BO75015 233 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 C10orf91Q5T1B1 145 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TMEM88Q6PEY1 159 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 SSX9Q7RTT3 188 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 VKORC1Q9BQB6 163 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 RBKSQ9H477 322 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 ZNF665Q9H7R5 613 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 CLN8Q9UBY8 286 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 HSPB7Q9UBY9 170 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 CARHSP1Q9Y2V2 147 aaKnown RBP6.27□□□□□ -1.41
IFT88-201ENST00000319980 ATRXP46100 2492 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TRGV10A0A0A0MS01 117 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 KBTBD11-OT1A0A1B0GTJ5 212 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 DNASE2O00115 360 aaPredicted RBP6.27□□□□□ -1.41
IFT88-201ENST00000319980 F2RL2O00254 374 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 SLC31A2O15432 143 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 NFYBP25208 207 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 HBG1P69891 147 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 HBG2P69892 147 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TLE1Q04724 770 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 GUK1Q16774 197 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 SPINK9Q5DT21 86 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 AKR1C8PQ5T2L2 129 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 ARL6IP6Q8N6S5 226 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 TCTEX1D1Q8N7M0 179 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 Q8TCH9 128 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 CCL17Q92583 94 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 GAFA1Q96PS6 74 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 LAMP3Q9UQV4 416 aa6.27□□□□□ -1.41
IFT88-201ENST00000319980 ZG16O60844 167 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 P0C879 139 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 CGB3P0DN86 165 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 CGB7P0DN87 165 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 TAS2R30P59541 319 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 HNF4GQ14541 408 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 ZNF788Q6ZQV5 615 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 SCGB1C1Q8TD33 95 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 CD300LFQ8TDQ1 290 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 IFI27L2Q9H2X8 130 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 NGBQ9NPG2 151 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 FAM157AC9JC47 383 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 SNAPINO95295 136 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 H2AFB1P0C5Y9 115 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 FOSL1P15407 271 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 NDUFB7P17568 137 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 RPS16P62249 146 aaKnown RBP6.26□□□□□ -1.41
IFT88-201ENST00000319980 CCL20P78556 96 aa6.26□□□□□ -1.41
IFT88-201ENST00000319980 CT45A1Q5HYN5 189 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms