RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NXPH2O95156 264 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 UCP3P55916 312 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 FOXF2Q12947 444 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 WDR86Q86TI4 376 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM56Q96MV1 263 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 CTDSP1Q9GZU7 261 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
SHROOM1-201ENST00000319854 RELNP78509 3460 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 NUPR1O60356 82 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 NANOS1Q8WY41 292 aaKnown RBP13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 A0A0G2JRQ6 117 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 WNT9BO14905 357 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 NAPSAO96009 420 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 GALR1P47211 349 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 NMSQ5H8A3 153 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 SLC25A24Q6NUK1 477 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 SMIM7Q9BQ49 75 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 MSL2Q9HCI7 577 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 TRAPPC2LQ9UL33 140 aa13.11□□□□□ -0.31
SHROOM1-201ENST00000319854 PPP5D1E7EU14 171 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 MPV17P39210 176 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 SCCPDHQ8NBX0 429 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 MRPL30Q8TCC3 161 aaKnown RBP13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 PLPPR2Q96GM1 343 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 RNF150Q9ULK6 438 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 WDR1O75083 606 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 ARL16Q0P5N6 197 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 IQCJQ1A5X6 159 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 TDRG1Q3Y452 100 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 C1orf194Q5T5A4 169 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM18Q96B42 140 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM210A6NLX4 147 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 RPP30P78346 268 aaKnown RBP13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 ATP23Q9Y6H3 246 aa13.1□□□□□ -0.31
SHROOM1-201ENST00000319854 KMT2EQ8IZD2 1858 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 HMGB3O15347 200 aaKnown RBP13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 TGFBR3Q03167 851 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 BAXQ07812 192 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 FKBP11Q9NYL4 201 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 SMPD2O60906 423 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 IRF2P14316 349 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 IL24Q13007 206 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 PSG7Q13046 419 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 DIRC2Q96SL1 478 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 OR51I2Q9H344 312 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 ZDHHC11Q9H8X9 412 aa13.09□□□□□ -0.31
SHROOM1-201ENST00000319854 KIR2DS1A0A191URI9 304 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 OR2H2O95918 312 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 HOXC12P31275 282 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DS4P43632 304 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 BPIFB3P59826 476 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DS1Q14954 304 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 BSXQ3C1V8 233 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 MBD3L1Q8WWY6 194 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 ACY3Q96HD9 319 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 MPC1Q9Y5U8 109 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 PSG2P11465 335 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 LTC4SQ16873 150 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 TMEM241Q24JQ0 296 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 ACTL10Q5JWF8 245 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 GBGT1Q8N5D6 347 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 NAT8Q9UHE5 227 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DL5BA0A0G2JN68 375 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DL5BA0A0G2JPC4 375 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 H7BYZ3 331 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 TUSC2O75896 110 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 OR3A1P47881 315 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 PRAMEF6Q5VXH4 476 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 FAM214BQ7L5A3 538 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 KIR2DL5AQ8N109 375 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 GATAD1Q8WUU5 269 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 GMPPAQ96IJ6 420 aaPredicted RBP13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 SPIN2AQ99865 258 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 SPIN2BQ9BPZ2 258 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 RTL8AQ9BWD3 113 aa13.08□□□□□ -0.32
SHROOM1-201ENST00000319854 OR5B21A6NL26 309 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF737O75373 536 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 IFNA5P01569 189 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 SERPINE2P07093 398 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 MRPL49Q13405 166 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 PCSK4Q6UW60 755 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 OPN3Q9H1Y3 402 aaPredicted RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 TLN1Q9Y490 2541 aaKnown RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 METTL15P1P0C7V9 234 aa13.07□□□□□ -0.32
SHROOM1-201ENST00000319854 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms