RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 TLE1Q04724 770 aa11.53□□□□□ -0.56
VAMP2-201ENST00000316509 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 EFNB3Q15768 340 aa11.53□□□□□ -0.56
VAMP2-201ENST00000316509 PDLIM3Q53GG5 364 aaPredicted RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 PRR30Q53SZ7 412 aaPredicted RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 SPANXN5Q5MJ07 72 aa11.53□□□□□ -0.56
VAMP2-201ENST00000316509 FAM53AQ6NSI3 398 aaPredicted RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 ST6GALNAC3Q8NDV1 305 aa11.53□□□□□ -0.56
VAMP2-201ENST00000316509 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
VAMP2-201ENST00000316509 LINC00312Q9Y6C7 94 aa11.53□□□□□ -0.56
VAMP2-201ENST00000316509 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 TRGV8A0A0C4DH27 118 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 MARCH11A6NNE9 402 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 PPIAL4DF5H284 164 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 M0R1X1 148 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 AGPAT2O15120 278 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 PROP1O75360 226 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 NQO2P16083 231 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 ERVK-16P61578 105 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 LTC4SQ16873 150 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 SP5Q6BEB4 398 aaPredicted RBP11.52□□□□□ -0.56
VAMP2-201ENST00000316509 CENPVQ7Z7K6 275 aaPredicted RBP11.52□□□□□ -0.56
VAMP2-201ENST00000316509 LILRB2Q8N423 598 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 CCL13Q99616 98 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 TMEM231Q9H6L2 316 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 KIAA1456Q9P272 454 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 NDRG3Q9UGV2 375 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 SPTBN2O15020 2390 aa11.52□□□□□ -0.56
VAMP2-201ENST00000316509 H3BP45 60 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 ZG16O60844 167 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 GYPAP02724 150 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
VAMP2-201ENST00000316509 ID4P47928 161 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 GNB2P62879 340 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 OR2B11Q5JQS5 317 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 FAM201AQ5SY85 155 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 DHRS7BQ6IAN0 325 aaPredicted RBP11.52□□□□□ -0.57
VAMP2-201ENST00000316509 THNSL2Q86YJ6 484 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 OR4S2Q8NH73 311 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 DTD1Q8TEA8 209 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 DDB2Q92466 427 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 WDR61Q9GZS3 305 aaKnown RBP11.52□□□□□ -0.57
VAMP2-201ENST00000316509 EIF5A2Q9GZV4 153 aaKnown RBP11.52□□□□□ -0.57
VAMP2-201ENST00000316509 GAL3ST2Q9H3Q3 398 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 UNKLQ9H9P5 680 aaKnown RBP11.52□□□□□ -0.57
VAMP2-201ENST00000316509 SAP30LQ9HAJ7 183 aa11.52□□□□□ -0.57
VAMP2-201ENST00000316509 SHISA9B4DS77 424 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 B9A039 149 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 NDUFA2O43678 99 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SOX15O60248 233 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 FCGR3BO75015 233 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF134P52741 427 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SPCS3P61009 180 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CCL8P80075 99 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 GUCA2BQ16661 112 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.51□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 DEFB108BQ8NET1 73 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CLCC1Q96S66 551 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 C1QL1O75973 258 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CD3EP07766 207 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CHRNB4P30926 498 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 FHITP49789 147 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CT45A1Q5HYN5 189 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 OR10P1Q8NGE3 313 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 CT45A3Q8NHU0 189 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 RAB39BQ96DA2 213 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 AIFM2Q9BRQ8 373 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
VAMP2-201ENST00000316509 RAXQ9Y2V3 346 aa11.51□□□□□ -0.57
VAMP2-201ENST00000316509 TSPAN4O14817 238 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
VAMP2-201ENST00000316509 OR4A16Q8NH70 328 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 OR4C12Q96R67 309 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 COQ3Q9NZJ6 369 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 RBFOX3A6NFN3 312 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 CEBPZOSA8MTT3 80 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 E7EQL1 145 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 RBMXL2O75526 392 aaKnown RBP11.5□□□□□ -0.57
VAMP2-201ENST00000316509 FSTL3O95633 263 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 DAOP14920 347 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 MRPS11P82912 194 aaKnown RBP11.5□□□□□ -0.57
VAMP2-201ENST00000316509 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 POU2AF1Q16633 256 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
VAMP2-201ENST00000316509 ZNF429Q86V71 674 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms