RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ABCA1O95477 2261 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 OR2A4O95047 310 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 ARG1P05089 322 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 PRR30Q53SZ7 412 aaPredicted RBP11.55□□□□□ -0.56
DDX54-202ENST00000314045 CXorf58Q96LI9 332 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 OR2A7Q96R45 310 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 TP53RKQ96S44 253 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 RASL11BQ9BPW5 248 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
DDX54-202ENST00000314045 MMP26Q9NRE1 261 aa11.55□□□□□ -0.56
DDX54-202ENST00000314045 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 DKK1O94907 266 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 SRP14P37108 136 aaKnown RBP11.54□□□□□ -0.56
DDX54-202ENST00000314045 WFIKKN1Q96NZ8 548 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 PLSCR2Q9NRY7 297 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 OR51B2Q9Y5P1 312 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 TRAV24A0A0B4J272 114 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 LDLRAD4O15165 306 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 LIPFP07098 398 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 BTCP35070 178 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 CDC34P49427 236 aaPredicted RBP11.54□□□□□ -0.56
DDX54-202ENST00000314045 FAM90A1Q86YD7 464 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
DDX54-202ENST00000314045 LOC105371242A0A075B767 164 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 A0A0B4J293 547 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 SRSF10O75494 262 aaKnown RBP11.54□□□□□ -0.56
DDX54-202ENST00000314045 SSMEM1Q8WWF3 244 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 TRAF4Q9BUZ4 470 aaPredicted RBP11.54□□□□□ -0.56
DDX54-202ENST00000314045 DOK5Q9P104 306 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 ZNF835Q9Y2P0 537 aa11.54□□□□□ -0.56
DDX54-202ENST00000314045 RGS13O14921 159 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 DEDDO75618 318 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
DDX54-202ENST00000314045 HTR1DP28221 377 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 NTF4P34130 210 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 RHOBP62745 196 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 RPRMLQ8N4K4 120 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 S1PR2O95136 353 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 TMEM11P17152 192 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 OR2T6Q8NHC8 308 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 RNF138Q8WVD3 245 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 SPRY4Q9C004 299 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 ZNF106Q9H2Y7 1883 aaKnown RBP11.53□□□□□ -0.56
DDX54-202ENST00000314045 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 TFF1P04155 84 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 ATP6V0CP27449 155 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 SPCS3P61009 180 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 DHRS11Q6UWP2 260 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 OR52M1Q8NGK5 317 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 NEU4Q8WWR8 484 aaPredicted RBP11.53□□□□□ -0.56
DDX54-202ENST00000314045 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 LILRA1O75019 489 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 FLI1Q01543 452 aaPredicted RBP11.53□□□□□ -0.56
DDX54-202ENST00000314045 WDR31Q8NA23 367 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 IL22RA2Q969J5 263 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
DDX54-202ENST00000314045 PIEZO2Q9H5I5 2752 aa11.52□□□□□ -0.56
DDX54-202ENST00000314045 IGHV1-46P01743 117 aa11.52□□□□□ -0.56
DDX54-202ENST00000314045 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.56
DDX54-202ENST00000314045 UQCC3Q6UW78 93 aa11.52□□□□□ -0.56
DDX54-202ENST00000314045 GTF3AQ92664 365 aaKnown RBP11.52□□□□□ -0.56
DDX54-202ENST00000314045 IGKV1D-8A0A087WSZ0 117 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 F8VVB4 439 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 F8VWA3 439 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 HLA-GP17693 338 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 ORM2P19652 201 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 FGF8P55075 233 aaPredicted RBP11.52□□□□□ -0.57
DDX54-202ENST00000314045 H1FOOQ8IZA3 346 aaPredicted RBP11.52□□□□□ -0.57
DDX54-202ENST00000314045 RTBDNQ9BSG5 229 aaPredicted RBP11.52□□□□□ -0.57
DDX54-202ENST00000314045 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 CLEC3BP05452 202 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 MMP9P14780 707 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 LGALS7P47929 136 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 TMEM140Q9NV12 185 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 SLC45A2Q9UMX9 530 aa11.52□□□□□ -0.57
DDX54-202ENST00000314045 FREM1Q5H8C1 2179 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 SLC25A17O43808 307 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 PDLIM4P50479 330 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 DVL1P1P54792 670 aaPredicted RBP11.51□□□□□ -0.57
DDX54-202ENST00000314045 RPL8P62917 257 aaKnown RBP11.51□□□□□ -0.57
DDX54-202ENST00000314045 KBTBD11-OT1A0A1B0GTJ5 212 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 DVL1O14640 695 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 NPBWR1P48145 328 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 RPL39P5Q59GN2 51 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 MBNL2Q5VZF2 373 aaKnown RBP11.51□□□□□ -0.57
DDX54-202ENST00000314045 PNKDQ8N490 385 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 BPIFCQ8NFQ6 507 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 TLN1Q9Y490 2541 aaKnown RBP11.51□□□□□ -0.57
DDX54-202ENST00000314045 LYNX1G3V0Z9 82 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 OR2C1O95371 312 aa11.51□□□□□ -0.57
DDX54-202ENST00000314045 LYNX1P0DP58 116 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms