RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PNRC1Q12796 327 aaPredicted RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 CLPPQ16740 277 aaPredicted RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 OR10S1Q8NGN2 331 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 TUBA4BQ9H853 241 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 ABCA3Q99758 1704 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 ZNF324BQ6AW86 544 aaPredicted RBP10.91□□□□□ -0.66
USP38-201ENST00000307017 SFRP2Q96HF1 295 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 PHLDA3Q9Y5J5 127 aa10.91□□□□□ -0.66
USP38-201ENST00000307017 A0A0U1RRA0 63 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 A0A1W2PPV9 198 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 OR4C45A6NMZ5 311 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 GDF9O60383 454 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 S1PR2O95136 353 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 PSG4Q00888 419 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 ANKRD33Q7Z3H0 272 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 KCNS1Q96KK3 526 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.66
USP38-201ENST00000307017 THY1P04216 161 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 HOXD4P09016 255 aaPredicted RBP10.9□□□□□ -0.66
USP38-201ENST00000307017 HOXA6P31267 233 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 TRAV17A0A0B4J275 112 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 A0A0B4J293 547 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 APOMO95445 188 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 TBX6O95947 436 aaPredicted RBP10.9□□□□□ -0.66
USP38-201ENST00000307017 ERGP11308 486 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 LHX8Q68G74 356 aa10.9□□□□□ -0.66
USP38-201ENST00000307017 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
USP38-201ENST00000307017 CTXND1A0A1B0GTU2 59 aa10.9□□□□□ -0.67
USP38-201ENST00000307017 ANOS1P23352 680 aa10.9□□□□□ -0.67
USP38-201ENST00000307017 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.67
USP38-201ENST00000307017 GPR146Q96CH1 333 aa10.9□□□□□ -0.67
USP38-201ENST00000307017 DOCK1Q14185 1865 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 WNT9BO14905 357 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 SRD5A1P18405 259 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
USP38-201ENST00000307017 GOLT1AQ6ZVE7 132 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 ITLN1Q8WWA0 313 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 WIPI2Q9Y4P8 454 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 CEACAM3P40198 252 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 LINC00299Q6ZSB3 139 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 AQP10Q96PS8 301 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 CTDSPLO15194 276 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 FXYD7P58549 80 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 SRSF3P84103 164 aaKnown RBP10.89□□□□□ -0.67
USP38-201ENST00000307017 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 LILRA5A6NI73 299 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 CA1P00915 261 aaPredicted RBP10.89□□□□□ -0.67
USP38-201ENST00000307017 SRD5A2P31213 254 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 RND3P61587 244 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 RPL39P5Q59GN2 51 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
USP38-201ENST00000307017 OR10J6PQ8NGY7 276 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 MRPL16Q9NX20 251 aaKnown RBP10.89□□□□□ -0.67
USP38-201ENST00000307017 HYPMO75409 117 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 TFF3Q07654 80 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 GPBAR1Q8TDU6 330 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
USP38-201ENST00000307017 ISG15P05161 165 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 VDAC1P21796 283 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 RND2P52198 227 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 TMEM127O75204 238 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 FUT5Q11128 374 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 RP1P56715 2156 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 P2RY4P51582 365 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 C2orf68Q2NKX9 166 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 LEMD1Q68G75 181 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 ZNF818PQ6ZRF7 136 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 RAB1CQ92928 201 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 RAB24Q969Q5 203 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 IL19Q9UHD0 177 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 LRRC75BQ2VPJ9 315 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 TMEM78Q5T7P6 136 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 ZPBPQ9BS86 351 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 KCNMB2Q9Y691 235 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 PRR32B1ATL7 298 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 M0R381 172 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 NMBP08949 121 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 UCP3P55916 312 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 OR1L8Q8NGR8 309 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 ZNF721Q8TF20 911 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 PGLYRP1O75594 196 aaPredicted RBP10.88□□□□□ -0.67
USP38-201ENST00000307017 CD160O95971 181 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 ADTRPQ96IZ2 230 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 DUX5Q96PT3 197 aa10.88□□□□□ -0.67
USP38-201ENST00000307017 RAC3P60763 192 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 GPR82Q96P67 336 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 ASCL2Q99929 193 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
USP38-201ENST00000307017 KIF13BQ9NQT8 1826 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 CD24P25063 80 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 SPEM1Q8N4L4 309 aa10.87□□□□□ -0.67
USP38-201ENST00000307017 ZNF645Q8N7E2 425 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms