RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TSPOP30536 169 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 HIST1H4AP62805 103 aaKnown RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 TCF23Q7RTU1 214 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 ELSPBP1Q96BH3 223 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 SLC25A2Q9BXI2 301 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 TMEFF2Q9UIK5 374 aaPredicted RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 C17orf51A8MQB3 221 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 FAM89BQ8N5H3 189 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 PRF1P14222 555 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 MRGPRX3Q96LB0 322 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 ALX4Q9H161 411 aaPredicted RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 RPL31P62899 125 aaKnown RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 DEGS2Q6QHC5 323 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 CTLA4P16410 223 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
TRIM56-201ENST00000306085 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
TRIM56-201ENST00000306085 ASB10Q8WXI3 467 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 FGF5P12034 268 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 GALP22466 123 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 IL11RAQ14626 422 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 HOXA3O43365 443 aaPredicted RBP11.68□□□□□ -0.54
TRIM56-201ENST00000306085 GPR6P46095 362 aaPredicted RBP11.68□□□□□ -0.54
TRIM56-201ENST00000306085 DPTQ07507 201 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 TINAGQ9UJW2 476 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 MRPL20Q9BYC9 149 aaKnown RBP11.68□□□□□ -0.54
TRIM56-201ENST00000306085 TNFSF14O43557 240 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 FGF9P31371 208 aaPredicted RBP11.68□□□□□ -0.54
TRIM56-201ENST00000306085 SOX8P57073 446 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 QTRT1Q9BXR0 403 aaKnown RBP11.68□□□□□ -0.54
TRIM56-201ENST00000306085 TOPAZ1Q8N9V7 1692 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 hCG_38984A0A1B0GV85 526 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 FAM159AQ6UWV7 190 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 MPC1Q9Y5U8 109 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 FAM106CPP0CH98 169 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
TRIM56-201ENST00000306085 RPS11P62280 158 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRIM56-201ENST00000306085 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 MBD1Q9UIS9 605 aaPredicted RBP11.67□□□□□ -0.54
TRIM56-201ENST00000306085 MAST2Q6P0Q8 1798 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 REG1AP05451 166 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
TRIM56-201ENST00000306085 DPRXA6NFQ7 191 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 VEGFBP49765 207 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 COL10A1Q03692 680 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 LHX8Q68G74 356 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 PGLYRP3Q96LB9 341 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 FOXI3A8MTJ6 420 aaPredicted RBP11.67□□□□□ -0.54
TRIM56-201ENST00000306085 C12orf73Q69YU5 71 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 OR4D11Q8NGI4 311 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 SCAND1P57086 179 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 MC5RP33032 325 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 MED12LQ86YW9 2145 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 FIZ1Q96SL8 496 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 GABRG2P18507 467 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 SLC25A15Q9Y619 301 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 IGKV6D-21A0A0A0MT36 114 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 H3BTX0 84 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 LINC00614P0C842 121 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 VSTM2LQ96N03 204 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 ARHGAP21Q5T5U3 1957 aa11.67□□□□□ -0.54
TRIM56-201ENST00000306085 TNRC6AQ8NDV7 1962 aaKnown RBP11.67□□□□□ -0.54
TRIM56-201ENST00000306085 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 NPIPB9F8W1W9 429 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 NPIPB7O75200 414 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 FGF14Q92915 247 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 SLC17A3O00476 420 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 AGAP20933 346 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 PF4P02776 101 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 DCTN5Q9BTE1 182 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 OR2H1Q9GZK4 316 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 ZNF688P0C7X2 276 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 GGTLC2Q14390 218 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 CNRIP1Q96F85 164 aaPredicted RBP11.66□□□□□ -0.54
TRIM56-201ENST00000306085 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 NRIP2Q9BQI9 281 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 THY1P04216 161 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 HTN3P15516 51 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 C3AR1Q16581 482 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 C10orf111Q8N326 155 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 CRPP02741 224 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 LCN2P80188 198 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 DSPPQ9NZW4 1301 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 CD1AP06126 327 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 GZMHP20718 246 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 SERF2P84101 59 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 NKG7Q16617 165 aa11.66□□□□□ -0.54
TRIM56-201ENST00000306085 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms