RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 LIFP15018 202 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 ABLIM2Q6H8Q1 611 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 MRPL54Q6P161 138 aaKnown RBP11.09□□□□□ -0.63
TRIM35-201ENST00000305364 ATOH7Q8N100 152 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 WDR87Q6ZQQ6 2873 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A10PA6NDY2 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A18PA6NE21 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A16PA6NEW6 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A20PA6NIJ5 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A8PA6NJQ4 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A7PA6NKC0 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A22PA8MWA6 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A12PA8MX19 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A5PA8MXJ8 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A23PA8MXZ1 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 NGFP01138 241 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A15PP0C7V4 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A13PP0C7W8 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A14PP0C7W9 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 FAM90A24PP0C7X0 464 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 CD46P15529 392 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 BRS3P32247 399 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 RNF24Q9Y225 148 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 DEFB108AA8MXU0 73 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 H0Y8G0 127 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 SLC17A3O00476 420 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 EDDM3AQ14507 147 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 PRSS8Q16651 343 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 DIRC2Q96SL1 478 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
TRIM35-201ENST00000305364 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 LPAR2Q9HBW0 351 aa11.09□□□□□ -0.63
TRIM35-201ENST00000305364 OR7C2O60412 319 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 TIAF1O95411 115 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 MMDQ15546 238 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 OR8I2Q8N0Y5 310 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 NFAM1Q8NET5 270 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-201ENST00000305364 NANOS1Q8WY41 292 aaKnown RBP11.08□□□□□ -0.64
TRIM35-201ENST00000305364 LNP1A1A4G5 178 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 RSPO1Q2MKA7 263 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-201ENST00000305364 CEACAM21Q3KPI0 293 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 RTL8AQ9BWD3 113 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 C12orf49Q9H741 205 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 IGHV3-43A0A0B4J1X8 118 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 TNFSF13O75888 250 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 IGHV3-43DP0DP04 118 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 LEMD1Q68G75 181 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 MOB1BQ7L9L4 216 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 CARFQ8N187 725 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 OR5A2Q8NGI9 324 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 DLL3Q9NYJ7 618 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 UQCR10Q9UDW1 63 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 RNF115Q9Y4L5 304 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 ZNF318Q5VUA4 2279 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 SELEP16581 610 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 OTX1P32242 354 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-201ENST00000305364 GNG4P50150 75 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 SOX8P57073 446 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 HIST3H3Q16695 136 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 SLC35E1Q96K37 410 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 CCDC74BQ96LY2 380 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 FER1L6-AS2Q96M78 137 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 QTRT1Q9BXR0 403 aaKnown RBP11.08□□□□□ -0.64
TRIM35-201ENST00000305364 HTTP42858 3142 aa11.08□□□□□ -0.64
TRIM35-201ENST00000305364 CRYGSP22914 178 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 LINC00696Q6ZRV3 163 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 DTX1Q86Y01 620 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 SMRP1Q8NCR6 262 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 KCNE4Q8WWG9 221 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 DERL1Q9BUN8 251 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 NPCDR1Q9BY65 106 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 POLDIP2Q9Y2S7 368 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 CD1BP29016 333 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 KCNIP2Q9NS61 270 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 ARL2-SNX15V9GYD0 113 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 LINC00614P0C842 121 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 NXPH1P58417 271 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 STUMQ69YW2 141 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 CXorf67Q86X51 503 aaPredicted RBP11.07□□□□□ -0.64
TRIM35-201ENST00000305364 DRAM1Q8N682 238 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 AGMATQ9BSE5 352 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 TIMM9Q9Y5J7 89 aa11.07□□□□□ -0.64
TRIM35-201ENST00000305364 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
TRIM35-201ENST00000305364 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 POLEQ07864 2286 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 ARL14EPLP0DKL9 152 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 CYB561P49447 251 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 GUSBP11Q6P575 273 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 LINC01551Q86U37 167 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 PSG11Q9UQ72 335 aa11.06□□□□□ -0.64
TRIM35-201ENST00000305364 FAM166BA8MTA8 275 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms