RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PRDM14Q9GZV8 571 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 CALYQ9NYX4 217 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 TGIF2-C20orf24A0A0A6YYL0 155 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 TMEM189A5PLL7 270 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 EIF3GO75821 320 aaKnown RBP eCLIP11.97□□□□□ -0.49
PRKCB-201ENST00000303531 NPBWR2P48146 333 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 DLX1P56177 255 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 ZNF818PQ6ZRF7 136 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 TXNDC17Q9BRA2 123 aa11.97□□□□□ -0.49
PRKCB-201ENST00000303531 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-201ENST00000303531 MUC15Q8N387 334 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 OR4A5Q8NH83 315 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 TMEM14DPA8MWL7 114 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 KLF7O75840 302 aaPredicted RBP11.96□□□□□ -0.49
PRKCB-201ENST00000303531 OR2A4O95047 310 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 THY1P04216 161 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 TNFRSF9Q07011 255 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 NHLRC3Q5JS37 347 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 SAXO1Q8IYX7 474 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 OR2A7Q96R45 310 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 LOC101059948A0A1B0GTJ6 334 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 ZG16O60844 167 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 FTH1P19P0C7X4 201 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 SELENOTP62341 195 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 PCOLCEQ15113 449 aa11.96□□□□□ -0.49
PRKCB-201ENST00000303531 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.96□□□□□ -0.5
PRKCB-201ENST00000303531 MT-ND6P03923 174 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 ID1P41134 155 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 KIR2DL2P43627 348 aaPredicted RBP11.96□□□□□ -0.5
PRKCB-201ENST00000303531 LOXL3P58215 753 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 RND3P61587 244 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 KRTCAP3Q53RY4 240 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 PILRBQ9UKJ0 227 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 MARCH11A6NNE9 402 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 NMUP48645 174 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 STPG1Q5TH74 334 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.5
PRKCB-201ENST00000303531 CALHM1Q8IU99 346 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM171Q8WVE6 324 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 ZFP30Q9Y2G7 519 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 A0A1W2PQM1 296 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 SSTR5P35346 364 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 RPS11P62280 158 aaKnown RBP eCLIP11.96□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM187Q14656 261 aa11.96□□□□□ -0.5
PRKCB-201ENST00000303531 KLF14Q8TD94 323 aaPredicted RBP11.96□□□□□ -0.5
PRKCB-201ENST00000303531 DYNLRB2Q8TF09 96 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 CACNA1IQ9P0X4 2223 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 IZUMO4Q1ZYL8 232 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF207O43670 478 aaKnown RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 S1PR2O95136 353 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 HOXD4P09016 255 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 AHCTF1Q8WYP5 2266 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 PGPA6NDG6 321 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 IGKV3-11P04433 115 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 PQLC2Q6ZP29 291 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 ATG101Q9BSB4 218 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 SHISA3A0PJX4 238 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 NAT2P11245 290 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 RBBP6Q7Z6E9 1792 aaKnown RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 RND2P52198 227 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 SLC25A53Q5H9E4 307 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 LEAP2Q969E1 77 aa11.95□□□□□ -0.5
PRKCB-201ENST00000303531 CISD1Q9NZ45 108 aaKnown RBP11.95□□□□□ -0.5
PRKCB-201ENST00000303531 AREGP15514 252 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 MMD2Q8IY49 270 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 SDHCQ99643 169 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-201ENST00000303531 ARL14EPLP0DKL9 152 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 APCDD1LQ8NCL9 501 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 OR1P1Q8NH06 330 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 LOC102724200A0A096LPH7 203 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-201ENST00000303531 RELBQ01201 579 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 POC1AQ8NBT0 407 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 HSPB7Q9UBY9 170 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 MYOFQ9NZM1 2061 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM229AB2RXF0 380 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 DANCRP0C864 163 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM54Q969K7 222 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 FHITP49789 147 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 STARD6P59095 220 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 TMEM78Q5T7P6 136 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 KLF4O43474 513 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 SLC25A17O43808 307 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 COX5BP10606 129 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 TGIF1Q15583 401 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 FGF11Q92914 225 aa11.94□□□□□ -0.5
PRKCB-201ENST00000303531 H3BVH4 76 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 TIAF1O95411 115 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 SPSB2Q99619 263 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 HSPE1P61604 102 aaKnown RBP11.93□□□□□ -0.5
PRKCB-201ENST00000303531 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 LRRC37AA6NMS7 1700 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 COTL1Q14019 142 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 M0R3E3 92 aa11.93□□□□□ -0.5
PRKCB-201ENST00000303531 GLIPR1P48060 266 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms