RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 ZIC3O60481 467 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 LINC00869P0C866 280 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 RTN4RQ9BZR6 473 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 LPAR5Q9H1C0 372 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 NPVFQ9HCQ7 196 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 MSRB2Q9Y3D2 182 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 NINQ8N4C6 2090 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 ADAM11O75078 769 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 PRSS23O95084 383 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 S1PR2O95136 353 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 CXorf1O96002 111 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 SPNP16150 400 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 MEOX2P50222 304 aa11.15□□□□□ -0.62
ABR-202ENST00000302538 QTRT1Q9BXR0 403 aaKnown RBP11.15□□□□□ -0.62
ABR-202ENST00000302538 C17orf100A8MU93 164 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 THBDP07204 575 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 MELTFP08582 738 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 LIMS1P48059 325 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.63
ABR-202ENST00000302538 GZMKP49863 264 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 TMEM140Q9NV12 185 aa11.15□□□□□ -0.63
ABR-202ENST00000302538 PIKFYVEQ9Y2I7 2098 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 NTN3O00634 580 aaPredicted RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 SRSF10O75494 262 aaKnown RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 C10orf128Q5T292 105 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 Q6ZN92 141 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 HELTA6NFD8 242 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 RAMP1O60894 148 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 CRISP2P16562 243 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 VDAC2P45880 294 aaPredicted RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 HIST1H3AP68431 136 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
ABR-202ENST00000302538 TMEM255AQ5JRV8 349 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 ADAD2Q8NCV1 583 aaKnown RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 OR5P3Q8WZ94 311 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 A0A0G2JLM5 398 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 CTDSPLO15194 276 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 SELENOTP62341 195 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 TMEM97Q5BJF2 176 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 BPIFA4PQ86YQ2 179 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 ITLN2Q8WWU7 325 aaPredicted RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 CPN1P15169 458 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 RCC1P18754 421 aaPredicted RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 GZMMP51124 257 aa11.14□□□□□ -0.63
ABR-202ENST00000302538 LSM10Q969L4 123 aaKnown RBP11.14□□□□□ -0.63
ABR-202ENST00000302538 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 IGKV1D-33P01593 117 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 IGKV1-33P01594 117 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 HERVK_113P61574 105 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 RNF212Q495C1 297 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 LDLRAD3Q86YD5 345 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 ZNF680Q8NEM1 530 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 AP5S1Q9NUS5 200 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 CACNA1BQ00975 2339 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
ABR-202ENST00000302538 IGKV1D-42A0A075B6H8 117 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 CRYBA2P53672 197 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 TCTEX1D1Q8N7M0 179 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 IGHV3OR16-13A0A075B7E8 117 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 IGHV3-74A0A0B4J1X5 117 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 HTN3P15516 51 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 FSTP19883 344 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 RAG2P55895 527 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 DSCR9P59020 149 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 PTX4Q96A99 478 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 ZNF430Q9H8G1 570 aaPredicted RBP11.13□□□□□ -0.63
ABR-202ENST00000302538 LMX1BO60663 402 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 PAGE4O60829 102 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 SLC35E4Q6ICL7 350 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 C8orf46Q8TAG6 207 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 PRSS22Q9GZN4 317 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 NEUROG3Q9Y4Z2 214 aa11.13□□□□□ -0.63
ABR-202ENST00000302538 CDRT15L2A8MXV6 281 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 CLDN34H7C241 214 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 SSTR5P35346 364 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 SLC16A13Q7RTY0 426 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 WDFY1Q8IWB7 410 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 DCAF16Q9NXF7 216 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 MAS1LP35410 378 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 COLCA1Q6ZS62 124 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 OR10G8Q8NGN5 311 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 TOLLIPQ9H0E2 274 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 FNDC1Q4ZHG4 1894 aaPredicted RBP11.12□□□□□ -0.63
ABR-202ENST00000302538 CACNA1HO95180 2353 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 SLC35B3Q9H1N7 401 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 MMP26Q9NRE1 261 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 CACNA1IQ9P0X4 2223 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 H0Y980 276 aa11.12□□□□□ -0.63
ABR-202ENST00000302538 SIAH2O43255 324 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms